Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02170 ATGTCGACTACAGACGGCGCAAGTAACGGCGTCAGTAACGGGGCTCTCATGGTCATGGACCCTCAAAGGCAGCAGCCACCAGGTAACGGCGCGTTAACGGTGAAGAAACCTCCTGCGAAGGACCGTCACAGCAAAGTAGATGGCCGTGGACGGCGCATCCGCATGCCGATCATCTGTGCCGCCAGGGTGTTTCAACTGACTAGAGAACTCGGTCATAAATCAGATGGTCAGACCATTGAATGGCTTCTCCGACAAGCTGAGCCGTCCATCATCGCAGCTACTGGGACTGGGACCACCCCGGCGAGCTTCTCTGCTGTAGCCGTCTCCGTTAGAGGATCCTCTAGTACGTCGATATCTGCTTCGCTTGATCAAAAACCAACTCCCCCGATGCTTGGTCCCACACCGTTCATACTCGGTAAGCGCCTCAGGACCGACGATGATGCGGACGAGGGTGCAAAAGATGACGCTGCAGCTGCATCTGTGGGTCCCAGCGCCGCTGCGGCTGCCGCCGCCGCTGCAGCAGCAGCAGGCGGTTTCTGGGCCGTACCTGCCCGGCCGGATTTTGGTCAGGTTTGGAGTTTTGCGGCCGCACCGGAGATGGTGGTGCCGATGCCTACTATGGCATCGCAGTCGTCGATGTCGGCGCGGTTCGGTCAGCAGCAGCCTATCGGAGAGGCGTCGGCGGCTAGGGTTGGGAATTATCTTCCGATGACGCAAGGGCATCTGAATTTGCTTGCATCGTTGTCCGGTGCGTCGGCTTCGTCGGGGAGGAGAGACGATGAGCCTCGTTGA 792 0.5922 MSTTDGASNGVSNGALMVMDPQRQQPPGNGALTVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSAVAVSVRGSSSTSISASLDQKPTPPMLGPTPFILGKRLRTDDDADEGAKDDAAAASVGPSAAAAAAAAAAAAGGFWAVPARPDFGQVWSFAAAPEMVVPMPTMASQSSMSARFGQQQPIGEASAARVGNYLPMTQGHLNLLASLSGASASSGRRDDEPR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02170 263 MobiDBLite consensus disorder prediction 1 47 - -
Eupl04g02170 263 Pfam TCP family transcription factor 39 136 IPR017887 -
Eupl04g02170 263 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 226 IPR005333 GO:0003700
Eupl04g02170 263 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02170 Eupl-Chr4 52027098 52027889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02170 12 263 TCP Transcription Factor Family AT5G23280 62.598 2.72e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Eupl04g02170 TCP 1.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02170 K16221 - nnu:104592127 366.311