Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02152 ATGGCACCTTTCACACCAATTTCTTCTTCTTCTTCCTATCTCCTCCACCTCCTCCTTCTTCTTCTTCTTCTTCCTCTCGCCTTCACCTCTGTTTTGGCTCGGACGTCGGACCCTAGTCGACTCGGACGTGAGATCTTAGCTCAACAAGAAGCCGACCGAGTCGTAAGACTTCCTGGTCAGCCCTTGGTGAAATTCCGGCAATACGCCGGATACGTGACAGTCAATGAGAGTCATGGAAGGGCATTATTCTATTGGTTCTTCGAGGCGACGCACAATCCTGAAAAAAAACCAGTCCTTTTGTGGCTCAATGGAGGTCCAGGATGCTCATCTATAGGGTTTGGAGAGGCAGAGGAGCTGGGACCTTTCTTAACGCAAAAGGGCACTCCAGAGTTGAAATTCAACAAACATACATGGAACAAAGCGGCCAATTTGTTATTCGTTGAATCTCCTGTTGGCGTCGGGTTTTCTTATACGAATACAAGCGAAGATATCAAAAAACTTGGCGATACAATCACAGCAAAGGATTTGTATACATTTCATATCAACTGGTTTCGACGATTCCCACAGTACAAGTCTCATGAGTTTTACATCTCGGGCGAAAGCTATGCAGGGCACTACGTTCCACAGCTTGCCGAGGCTATCTTTGATGCTAATAAGAAGGCTTCAAAGGAAGATTACATAAATCTCAAGGGTTTCATTATTGGGAATGCGTTATTGGATGACGAAACGGATCAGACGGGAATGATCGAATATGCTTGGGATCATGCCGTGATCTCTGATCGTGTGTACCACAACATTAAGATCAAATGCAACTTTAGCGATCCCGGCCCGGACAAAGAATGCGACGCTGCCCTCGATGAATATTTTGATGTTTACAAGATCATCGACATGTACAGCTTGTATGCTCCAATATGCCTCGAATTTAACGACACTGCTAGACGCCTTCCGATAATCGAAGGCAATATTGCTCCAAAACTATTCTCCAGATTTGATGGGTGGCGAAAGCAACCGGCGGGTTACGACCCGTGTGTGTCATATTACTCTGAGGCGTACTTCAATCGACCGGACGTTCAAGAAGCTCTTCATGCTAATGTCACCAAAATTTCTTACCCATGGACTCATTGCAGCATTGCAGGTATGCGAACCACTAACTTACACTTGTATTTTATCATCAACAGCGACAAGATCGATTTTTGGAACGACGCACCAGCCTCCATCCTTCCAATCATCAGAAAACTCGTAGCGGGAGGCCTCCGGATTTGGGTTTATAGCGGAGATGCCGACGGGAGAATCCCGGTAACAGCAACAAGATACACATTGAACAAGCTCGGATTCAATACTACCAAAGAATGGACTCCATGGTACAACCATCAGGAGGTTGGTGGGTGGACGATTATCTTCGATGGGCTCACATTTGTTACAGTGAGAGCTGCTGGTCACCAGGTTCCGACCTTCGCACCCAAGCAATCTCTTCAGCTGATTAAGCACTTCTTGGCCAATCAGAATCTGCCATCTGCTTCATTTAAATAA 1530 0.4601 MAPFTPISSSSSYLLHLLLLLLLLPLAFTSVLARTSDPSRLGREILAQQEADRVVRLPGQPLVKFRQYAGYVTVNESHGRALFYWFFEATHNPEKKPVLLWLNGGPGCSSIGFGEAEELGPFLTQKGTPELKFNKHTWNKAANLLFVESPVGVGFSYTNTSEDIKKLGDTITAKDLYTFHINWFRRFPQYKSHEFYISGESYAGHYVPQLAEAIFDANKKASKEDYINLKGFIIGNALLDDETDQTGMIEYAWDHAVISDRVYHNIKIKCNFSDPGPDKECDAALDEYFDVYKIIDMYSLYAPICLEFNDTARRLPIIEGNIAPKLFSRFDGWRKQPAGYDPCVSYYSEAYFNRPDVQEALHANVTKISYPWTHCSIAGMRTTNLHLYFIINSDKIDFWNDAPASILPIIRKLVAGGLRIWVYSGDADGRIPVTATRYTLNKLGFNTTKEWTPWYNHQEVGGWTIIFDGLTFVTVRAAGHQVPTFAPKQSLQLIKHFLANQNLPSASFK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02152 509 FunFam Carboxypeptidase 406 500 - -
Eupl04g02152 509 FunFam Carboxypeptidase 48 307 - -
Eupl04g02152 509 Gene3D - 406 499 - -
Eupl04g02152 509 Pfam Serine carboxypeptidase 59 500 IPR001563 GO:0004185|GO:0006508
Eupl04g02152 509 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Eupl04g02152 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Eupl04g02152 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Eupl04g02152 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Eupl04g02152 509 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Eupl04g02152 509 SUPERFAMILY alpha/beta-Hydrolases 49 503 IPR029058 -
Eupl04g02152 509 Gene3D - 343 378 - -
Eupl04g02152 509 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 54 487 IPR001563 GO:0004185|GO:0006508
Eupl04g02152 509 Gene3D alpha/beta hydrolase 48 306 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02152 Eupl-Chr4 51713776 51722633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02152 338 503 Calmodulin-binding Proteins AT2G22960 23.952 1.32e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02152 K16297 - nnu:104610107 743.421