Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02149 ATGGAAGAGGGAAACAAAGATGTCCAGACACGAAACACCGCTTCGACTTTAAGGAAACGACCCAACGTCAAAATGGAGGAGCGAAAAAGAAGAGAGAAGTTGGGAAAGCTCTTCTCATCTCTTCGGTCCGAGGTCCCCAAACTCAACTCCAAGTCATCCAAGATAACTGTGTTAAACGAAACAATGAAGTACATACAAGATCTTCAAGAAACGGTACAAATGTTGGGGGGACAGGTTGAGCCAAAGGCGGAGTTGAATAAGGAGGTTGTGGAGGAAGACATTTTGAAACAGTTGGGGCTAGAAGATGAGTTCAAGTTCACGGAAGAGATTTCAGAATGGTTAGAGAAAGATTTGGACTCAGTGGAGATGATTGGACGGTCAATTTTTCAATGCACCAACCAGAATTCCTATGTCTACCTGACTGTTTGCAACAACATGGCGATTTTTCAAATACGTTCGGTGGTCCAACGGATTACAGTTAGTGATGTTTTCAAGGTGTTTGAGAGCCACAAGGCAAATGTCTTGTCAGCTAACATTGTCGTTAGTTCTACGAACATTGTTGTCAGCGACACAGAGATCACAATAATGGTAACGGCTTTCGTTAACGGAGGAGAAGGCGATTTCGAGACAATCAAGAGGGACCTTATGTCTTTAGTGGTTTAG 663 0.4329 MEEGNKDVQTRNTASTLRKRPNVKMEERKRREKLGKLFSSLRSEVPKLNSKSSKITVLNETMKYIQDLQETVQMLGGQVEPKAELNKEVVEEDILKQLGLEDEFKFTEEISEWLEKDLDSVEMIGRSIFQCTNQNSYVYLTVCNNMAIFQIRSVVQRITVSDVFKVFESHKANVLSANIVVSSTNIVVSDTEITIMVTAFVNGGEGDFETIKRDLMSLVV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02149 220 Pfam Helix-loop-helix DNA-binding domain 24 69 IPR011598 GO:0046983
Eupl04g02149 220 SMART finulus 24 74 IPR011598 GO:0046983
Eupl04g02149 220 MobiDBLite consensus disorder prediction 1 27 - -
Eupl04g02149 220 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 68 IPR011598 GO:0046983
Eupl04g02149 220 CDD bHLH_AtbHLH_like 27 75 IPR045239 -
Eupl04g02149 220 Gene3D - 8 85 IPR036638 GO:0046983
Eupl04g02149 220 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 20 184 IPR044278 GO:0003700|GO:0006355|GO:0009960
Eupl04g02149 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 19 79 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02149 22 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 48.148 1.06e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl04g02149 HLH 2.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02149 - - csav:115723297 82.0333