Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02115 ATGATTTTACAATCAGCTTCTGCGAGCTTGTCTGTCTCGCAGATTTGCTGTCTCTCGCCTTTTTTCTGCCCTTGTAAGATAGATAGAATTGGAAGGAGAAGCCGAATCGAAATTGGAAGGAATTCTCGGTCTATTAAAACAAGGGAATTTCTTGGATTTATTCTCTCGCACAAAACTAGTCGTCGAAGAAGAAGATGGGTTTGTAAGGCATGTATGGTTCCCACCAATAGTGGGAACCCTAATAACCTGAATTTCGGACTTAGCTATTCAGCAAGGCGGAGCGCTAAAGCATTGGTTACGAAACGATTGTCTGATGAGTTGGATTATGGTGAATTGGCTTCTCAAGAGCCGATTCAAATGGCGTCGAACTTCACTGGCTTCCAAGAAGATCCTCTGGTAGATAAGCTCAGGACTCAGCTAGGGGTAATTCACCCCATTCCAGCGCCTCCAATCAATCGCAACATTGCTGGTTTGTTCGTGTTCTTTTTCTTTGTTGGGGTTGTTTTCGATAAACTTTGGACGTCGAGGAAGAAAAACAAACCCGATCCTGATGCTCGGCCTGGTATTTGGCCTCAGGTGCCAACTAGTTTTTCTCTTTTCCTTGAGAAGGATTTGCAAAGGAAAGAGTCGGTGGAATGGGTGAACATGGTTCTGGGAAAACTGTGGAAGGTGTACAGATCTGGGATTGAAAATTGGCTCATTGGATTGCTTCAGCCCGTTATTGATGACCTGAAGAAACCTGATTATGTGCAGAGAGTTGAAATAAAACAGTTCTCCTTGGGGGAAGAGCCCTTGTCAGTTAGGAACGTAGAGCGCCGAACTTCTCGCCGTGTTAATGATTTGCAGTACCAAATTGGCCTCCGTTATACAGGTGGTGCTCGCATGCTATTAATGCTTTCACTGAAATTCGGCATTATCCCCATAGTGGTACCAGTTGGTGTTCGAGATTTTGATATTGATGGAGAACTATGGGTCAAATTGCGGTTAATACCATCAGAGCCTTGGGTAGGAGCTGTCTCATGGGCTTTTGTGTCACTGCCGAAGATAAAGTTTGAGTTGTCACCATTCCGTCTGTTCAATCTCATGGCAATTCCTGTTCTCTCGATGTTCTTGACTAAACTTCTCACTGTGGATCTGCCTCGACTCTTTGTACGCCCAAAGAAGATTGTCCTAGATTTCCAGAAGGGAAAAGCAGTTGGTCCTTTTCTAAATTATTTCAAGACTGGAGAAGTTCAGGAAGGAAATAAGGATTTTGTTGGAGAACTGTCAGTGACTCTAGTAGATGCTCGGAAGCTTGCTTATTTTTTCTATGGGAAAACGGATCCATATGTTGTTCTAAATCTGGGAGATCAAGTAATTCGCAGTAAAAAGAACAGTCAGACCACTGTCATTGGGCCACCTGGCGAGCCAATATGGAATCAAGATTTTCATATGCTTGTTGCAAACCCTAGAAGACAGAAATTATTTATCCAGGTGAAGGACTCTCTTGGATTCACCAATTTAACTATCGGCACAGGGGAGGTTGAGCTGGGATCTCTACAGGACACTGTTCCGACAGACAGAATTGTGGTCTTGCAAGGAGGCTGGGGACTGTTTAGGAAGGGATCTTCTGGAGAAATATTACTTCGCTTGACATATAAAGCATATGTTGAGGATGAAGAGGATGATGGGACCGAGGTGGAATTAATGGAAACTGATGCTTCCGATGACGAGATGTCAGATTCTGATGAAGCAGATGCCACATATGAACAGAGTCAAATTGACTCAGATGGAACAGAGAAAGAATCTTTTATGAATGTACTAGCAGCTTTGCTTGTAAGTGAGGAGTTTCAAGGGATAGTGGCATCTGAAACAGGAAATATCAAACTTTCTGAGGTTGGCTCAAATCCGGAATCAACTCTATCAAGATCACGCAGTCGTAATTCTGAATCTGTACCCCTTAATTCTGAGAGTGGTTCAGAAAATCCTGGAGGAGCAGCATTATTTTGGCTTGCTGTGATCACAAGTATATCAGTGCTGATTGCTATCAATGTGGGTGGCTCAAGTTTCTTCAATCCTTGA 2061 0.4333 MILQSASASLSVSQICCLSPFFCPCKIDRIGRRSRIEIGRNSRSIKTREFLGFILSHKTSRRRRRWVCKACMVPTNSGNPNNLNFGLSYSARRSAKALVTKRLSDELDYGELASQEPIQMASNFTGFQEDPLVDKLRTQLGVIHPIPAPPINRNIAGLFVFFFFVGVVFDKLWTSRKKNKPDPDARPGIWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRSGIENWLIGLLQPVIDDLKKPDYVQRVEIKQFSLGEEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPSEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPRLFVRPKKIVLDFQKGKAVGPFLNYFKTGEVQEGNKDFVGELSVTLVDARKLAYFFYGKTDPYVVLNLGDQVIRSKKNSQTTVIGPPGEPIWNQDFHMLVANPRRQKLFIQVKDSLGFTNLTIGTGEVELGSLQDTVPTDRIVVLQGGWGLFRKGSSGEILLRLTYKAYVEDEEDDGTEVELMETDASDDEMSDSDEADATYEQSQIDSDGTEKESFMNVLAALLVSEEFQGIVASETGNIKLSEVGSNPESTLSRSRSRNSESVPLNSESGSENPGGAALFWLAVITSISVLIAINVGGSSFFNP* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02115 686 ProSiteProfiles C2 domain profile. 407 523 IPR000008 -
Eupl04g02115 686 MobiDBLite consensus disorder prediction 565 592 - -
Eupl04g02115 686 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 420 548 IPR035892 -
Eupl04g02115 686 SMART C2_3c 421 522 IPR000008 -
Eupl04g02115 686 MobiDBLite consensus disorder prediction 565 583 - -
Eupl04g02115 686 CDD SMP_SF 229 392 - -
Eupl04g02115 686 Gene3D C2 domain 410 550 IPR035892 -
Eupl04g02115 686 MobiDBLite consensus disorder prediction 624 654 - -
Eupl04g02115 686 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 207 394 IPR031468 GO:0008289
Eupl04g02115 686 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 56 686 - -
Eupl04g02115 686 Pfam C2 domain 420 516 IPR000008 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02115 412 480 C2H2 Transcription Factor Family AT4G05330 42.029 3.63e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02115 - - tss:122666318 1016.53