Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02101 ATGCAGATGTCTTCTGCCATGGCTCCTACTCCATTAACGGCGCCTCCTTCCAACTCCAACAACAATCCTCCCCCTTCCTCATCTTCCTCCATGAGATCGCCTCCTACACCTCTACCCTCCGCCCTCTCTCTCGGCATTCTTTCTCTCCCTGCTTCGTCATCCACACCGGCTTCACATCATCTTCATCATAATCATCTTCATCATAATCGTCCAACACCGCAGCCTGATAATCATCATCATCATGTTATTGTGCCGGAACCAATTACTACCGCACATCCGTCTGGGGAGGTCGCGCCTATTGCTAGGGTACGGCTTTCGGACATCATGCCTCATGATGGAGCGCCTGGGGGGACTTACATTAGGTCTGTGGAGGCGCTTTCGGGGTCACTGATGAGGCATAATGCCGCGGTGATTGAGCTGGGGTGTGAGGATTCTGCACTGATGCGATGCGCGTTGGAATCAGCAAGGTTGTATTTTAGGACGAGGGCTCAGAGTGGTGGTAGCAGCACCGGAGGGACTTGGGGGAAGCCGGGTAGGGTTTACATGTACAGGGCAGGAAGAGCTTTGGAAGATGGGGATTTGTCACCCCCATGTATGGCTGATGTTTTTAGATGTATGGGAAAGGCTGCTCGTGCTGCTCTGTGTGCGATAGCGAGGCATCTTCGTTTGCGCAGCGATGTTTTTAACCATATGCTCGATGATACCCCTTTGCCTGTCAATGAGGCATCATCGTCGGTGTTGGTCGCCGCCTATTCTCATGCATCCTTACAAAATGGGAAGGGGGCTATTGGGGGAGCGAAGCTAATGATGAACAGTGAAGTTGAGAAGGGATTGTTGACATTGATCGCCTCAGACAGTCCTGGTCTTCAGGTTTGTGACCCCAATAGTCGTTGGTACCTAGCAGATGGTGGGTCAGGTTCTGGGGATCTTTTGCTGCTTACAGGGAAGGCACTCAGCCATGCTACTGCTGGCCTTCGCCCTGCTGCCTCATATAGGGCTGCTCCTGATTACTCTTCAGGCACCATTAACAATGGAAGGACATCACTGGCATTTAGGCTCATGCCACTGGGCAATGCTATATTAGATTGTTCTCCGATTGCGGCGGCTGGTCATGTAATTCCCCATAGCTATGTACCAATCTCTGTAAGCCAATTCATGGATGACCTTTCTGCTGAGGAAGATGTGGTGTGCAACCGTTCTGATAATACTTATGAAGCTCGAAATAATTCAAATAGGGAACCATCATTGAGAAGCGTTCTTTCAGATCCCTTGTCTGGTGCATTTCTTGAAGATGCTATGGTCGTTTCATGTGGGCATTCATTTGGCGGTATCATGTTGAGAAAGGTCCTGGAAACGTCCAGATGTAGCCTTTGCAATGCAGAAATCGTAGGCGGGTCTTTGATCCCTAATCATGCTTTGAGAGCTGCGGCTAAAGCCGTGAAGCATGAGGATGACCGGAGACTCTTCTATAATGCTGCTCTTCGGAAGCGTCGGAAAGAAGTGGGTGAACACATGGATACAACGAAGAGAGTGAACAGGGTATACTTAAAAGAAGTGCCTGAAAAGGAAAATGGGGAGATGGCTGCGGATGGTGACAGCCCGAGGCAACAGAGGGGGGTGCAATATCCGTTTTCAGTTAATGAGAAAGTGGTAATTAAGGGAAACAGGAGAACTCCAGATAAATTTGTTGGAAGGGAAGCTATCATCACATCCCAGTGCCTCAATGGCTGGTACCTCCTTAAGATTCTTGGTAGTGGAGATAGTGTTCGCCTGCAATATCGTTCTCTACGAAAGATCTCAAGCTCTCAGGCCACCGAGGACAGGCGTCCATCACAACCAATCATTCAGAACAGTAGCTGA 1860 0.4962 MQMSSAMAPTPLTAPPSNSNNNPPPSSSSSMRSPPTPLPSALSLGILSLPASSSTPASHHLHHNHLHHNRPTPQPDNHHHHVIVPEPITTAHPSGEVAPIARVRLSDIMPHDGAPGGTYIRSVEALSGSLMRHNAAVIELGCEDSALMRCALESARLYFRTRAQSGGSSTGGTWGKPGRVYMYRAGRALEDGDLSPPCMADVFRCMGKAARAALCAIARHLRLRSDVFNHMLDDTPLPVNEASSSVLVAAYSHASLQNGKGAIGGAKLMMNSEVEKGLLTLIASDSPGLQVCDPNSRWYLADGGSGSGDLLLLTGKALSHATAGLRPAASYRAAPDYSSGTINNGRTSLAFRLMPLGNAILDCSPIAAAGHVIPHSYVPISVSQFMDDLSAEEDVVCNRSDNTYEARNNSNREPSLRSVLSDPLSGAFLEDAMVVSCGHSFGGIMLRKVLETSRCSLCNAEIVGGSLIPNHALRAAAKAVKHEDDRRLFYNAALRKRRKEVGEHMDTTKRVNRVYLKEVPEKENGEMAADGDSPRQQRGVQYPFSVNEKVVIKGNRRTPDKFVGREAIITSQCLNGWYLLKILGSGDSVRLQYRSLRKISSSQATEDRRPSQPIIQNSS* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02101 619 SUPERFAMILY Clavaminate synthase-like 201 385 - -
Eupl04g02101 619 MobiDBLite consensus disorder prediction 1 15 - -
Eupl04g02101 619 SUPERFAMILY RING/U-box 415 483 - -
Eupl04g02101 619 Gene3D - 191 394 IPR027443 -
Eupl04g02101 619 MobiDBLite consensus disorder prediction 1 81 - -
Eupl04g02101 619 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 97 607 - -
Eupl04g02101 619 MobiDBLite consensus disorder prediction 16 32 - -
Eupl04g02101 619 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 415 484 IPR013083 -
Eupl04g02101 619 MobiDBLite consensus disorder prediction 599 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02101 Eupl-Chr4 50435934 50475038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02101 416 598 Plant U-box Gene Family AT5G05230 37.158 1.51e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02101 - - nnu:104611796 891.723