Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02086 ATGGGTCTTAACTCAGTGTTCATAGACAAATGTCAAGCGTGCTTTAAGGACTCAGATTCAAGACGCTCCCACAATGAAATTGGAGGATTTAGGAAAAAACCTCTTACAAATGAGGATGAAGACTTCATTGTACGACACATGTCGCACAAAGAAGATGATGGGTACGAGAGCAACACCTTCTATGACCAGACAACGCACCCCGGCCACATTGGAATTTGTGGGGAAAAGAATGCGTTGCAAGAGAGTGATTTCAATGTAGCGGTTGACGGGCTATTAGCAGATCTTGTAACAGCAACACCAAGGATCAGTGGGTTCTTTGCAGCGGCAAAGCGGGAAGGGGTCAGCGGGGGTAATAGTAGTACTGTCGTGTATGGTGTGGCACAATGTGCGGAGACGGTGAGCGAGAGCAGATGCATGGATTGCTTGAGTGTTGCGTATAGCAATATAGAGCGCTGTCCACCTGAGGCGGACGGGAGAGCTGTGGATGCAGGCTGTTTTCTAAGGTATTCAGACACGGCGTTCTTCAGTAACGACCAAATAACTGATCTCATGCCCTTCTTGAAGAGTGGTGGTTCAAGCAAAAAAAAGGTGATTATTATTGGCGGCGTCGCGGGAGGTGCTGCCCTTTTGTTTCTGGTCGTGTTCATTGTATGGCTTAGTTTATTGAGAAGAAAGCCGAAGAAAGCTCGTAAAGGAGATATATTAGGGGCGACCGAGCTCCGGGGCCCAGTGAATTTCAGTTACAAAGATCTTAAATCAGCAACCAGAAATTTTAGTGAAGAAAATAAACTGGGACAAGGAGGATTTGGAGATGTATACAAAGGCGTTCTAAAGAATGGAAAAATTGTTGCAGTCAAGAAACTTGCAATAGGCCAATCCAGCAGAGCAAAGATGGATTTCGAGAGCGAAGTCAAGCTTATAAGCAATGTTCATCATCGGAACCTTATTCGCCTTCTTGGGTGTTGTAGCAAACGCCAAGAACTACTTCTCGTTTATGAGTACATGGCAAACAGCAGCCTCGACAAATTCTTATTCGGTGACAAACAAGGGGTCCTTGACTGGAAACGGCGGTTTGATATAATTGTTGGCATAGCTCGGGGTATTGCCTATCTACACGAGGAGTTCCATGTACGTATCATACACCGAGACATAAAGTCCAGTAATATACTGCTCGATGATGATTTCCAACCCAAAATTGCAGATTTTGGGTTGGCAAGGCTACTTCCTGAGGATCACAGTCATCTAAGTACCAAATTTGCTGGAACCTTGGGTTACACAGCACCTGAGTATGCAATCCATGGGCAGTTATCTGAGAAGGTTGACACGTACAGCTATGGCGTGGTTGTCCTTGAAATCATAAGCGGTCGAAAGTGCAACGACATGAAGCTTGAACCCGTCAATCAATACCTTCTTGAATCGGCATGGAAATTGTATGAGAATGACATGTTGATAGATTTGGTGGATGGGAGTTTAGACCCAAACCAATACAAAACGGATGAAGTAAAGAAAGTCATAGAGATTGCTCTCATGTGCACCCAGTCCTCAGTTGCTTCGAGGCCTACAATGTCTGAAGTTGTTGTTTTGCTGTTGAGCAAGGGCTCAATAGAGCACAAGCCAACCAGACCTACTTTCATTGATGCAACTAATAGGGTTCGTGGAGACACGTCCACCTCTACCGGCTCATCCACGTCCAATGCCACTGCTTCGATCACCGAAGTCTCAGGTCGTTAA 1731 0.4547 MGLNSVFIDKCQACFKDSDSRRSHNEIGGFRKKPLTNEDEDFIVRHMSHKEDDGYESNTFYDQTTHPGHIGICGEKNALQESDFNVAVDGLLADLVTATPRISGFFAAAKREGVSGGNSSTVVYGVAQCAETVSESRCMDCLSVAYSNIERCPPEADGRAVDAGCFLRYSDTAFFSNDQITDLMPFLKSGGSSKKKVIIIGGVAGGAALLFLVVFIVWLSLLRRKPKKARKGDILGATELRGPVNFSYKDLKSATRNFSEENKLGQGGFGDVYKGVLKNGKIVAVKKLAIGQSSRAKMDFESEVKLISNVHHRNLIRLLGCCSKRQELLLVYEYMANSSLDKFLFGDKQGVLDWKRRFDIIVGIARGIAYLHEEFHVRIIHRDIKSSNILLDDDFQPKIADFGLARLLPEDHSHLSTKFAGTLGYTAPEYAIHGQLSEKVDTYSYGVVVLEIISGRKCNDMKLEPVNQYLLESAWKLYENDMLIDLVDGSLDPNQYKTDEVKKVIEIALMCTQSSVASRPTMSEVVVLLLSKGSIEHKPTRPTFIDATNRVRGDTSTSTGSSTSNATASITEVSGR* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02086 576 ProSiteProfiles Gnk2-homologous domain profile. 66 174 IPR002902 -
Eupl04g02086 576 FunFam Cysteine-rich receptor-like protein kinase 2 335 537 - -
Eupl04g02086 576 ProSiteProfiles Protein kinase domain profile. 258 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g02086 576 SMART serkin_6 258 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g02086 576 MobiDBLite consensus disorder prediction 549 576 - -
Eupl04g02086 576 SUPERFAMILY Protein kinase-like (PK-like) 240 529 IPR011009 -
Eupl04g02086 576 ProSitePatterns Protein kinases ATP-binding region signature. 264 287 IPR017441 GO:0005524
Eupl04g02086 576 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 561 - -
Eupl04g02086 576 Gene3D Transferase(Phosphotransferase) domain 1 335 543 - -
Eupl04g02086 576 MobiDBLite consensus disorder prediction 548 576 - -
Eupl04g02086 576 FunFam Cysteine-rich receptor-like protein kinase 2 68 174 - -
Eupl04g02086 576 Pfam Salt stress response/antifungal 76 171 IPR002902 -
Eupl04g02086 576 Gene3D - 69 174 IPR038408 -
Eupl04g02086 576 Gene3D Phosphorylase Kinase; domain 1 233 334 - -
Eupl04g02086 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 379 391 IPR008271 GO:0004672|GO:0006468
Eupl04g02086 576 CDD STKc_IRAK 264 526 - -
Eupl04g02086 576 FunFam Cysteine-rich receptor-like protein kinase 2 223 334 - -
Eupl04g02086 576 Pfam Protein tyrosine and serine/threonine kinase 261 527 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02086 Eupl-Chr4 50017345 50095870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02086 56 576 Receptor kinase-like Gene Family AT1G70520 39.888 1.46e-114 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl04g02086 PK_Tyr_Ser-Thr 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02086 - - psom:113298259 749.199