Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02071 ATGGAACCTCTCATTTGTAGTTCAAGGTACTTTTTATTACTTTTGTTTCTATCTTTAGTTTCCGTTCTTCCTCTCGCAAGATCAGGCGACGCGGAAGTGCTTCTAACTCTCAAATCATTGCTCGATCCTTCGAACTCGCTTCCATGGCAAGAAGGATCCGATTTCTGCAAATGGAAAGGGATCAAAGAATGCACAGGAGGAAGGGTTACAAAGCTTGTTCTGGAGTACTTAAACCTGAGCGGAACCCTCGACAAGAAGAGCTTAAACCAGCTCGATCAGCTCCGCGTGTTGAGTTTCAAAGGAAACTCGATTTCCGGAGAAATCCCCAATCTCTCGGGCCTTGTCAATCTAAAATCACTCTTCCTCAACGACAACAAATTTACCGGCCATTTTCCGACCTCCATTTCAGGCCTTCACCGGTTAAAAGTCGTCGTATTGTCCGGAAACCAAATCTCCGGTGAGATTCCGGCATCCCTTCTCAAACTCCGCCGATTATACGTTCTTTATTTACAGAACAATCGCCTCACCGGAGAAATCCCACCTCTCAATCAAACCAGTCTCAGATACTTCAATGTCTCCAATAATCAACTTTCCGGCCAGATTCCATTATCTCCAACCCTCATTAGATTCAATTACTCGTCGTTCTCAAATAACTTAAACCTCTGCGGTGAACAGATACAGAAACCCTGTAATGGATTCCCTCCATCAATCAGCCCCGAACCTCCGGTCAAAGTGCCGTCCTCGTCTTCAAAGCATAAAAAACGGCGGAAGCTTATTAAGATTATTGCCGGAAGCATTGCTGGGTTTATTTTGTTGTTAATCTGTTTTTGTCTATTGTGGAGGGTTTGTAAGAAGAGGAGGAGGAGATTACGTGAGGTGAGGAACAAAGGAGTGGGCATTGAAGGAGGAGCGGGAGGAGAGGCATCTGGTATTGGTGGTGGTGGCGGCGGCGGCGGTGGTGGTAATGGAGGAAAACAAGGGGGTTTTTCATGGGAGGGAGAGGGATTGGGGAGTTTGGTGTTCTGCGGAGCAGGGGATCAACAGATGAATTACAGCTTGGAGGATTTGTTGAAGGCGTCGGCTGAGACGTTGGGGAGAGGGACGATTGGGAGTACTTACAAGGCGGTAATGGAGTCGGGGTTCATAGTGACGGTGAAGAGGTTGAGGGACTCTCGGTACCCAGGGCTGGACGAGTTTAGGAGGCAGATGGAGGTGCTTGGGAGGCTCAGACACCCTAACCTGGTCCCACTCAGGGCTTATTTCCAGGCCAAGGAAGAGCGTCTCCTCGTCTACGATTACTTCCCCAACGGCAGTTTGTTCTCCCTCATTCACGGATCAAGAACTTCGGGTGGTGGGAAGCCTCTTCACTGGACATCCTGCTTAAAAATAGCAGAGGACTTAGCAACAGGGTTAGTTTATCTCCACCAGACCCCTGGCCTGACCCATGGGAATTTGAAATCCTCCAATGTCTTGTTGGGTTCCGACTTTGAATCCTGCCTCACTGACTACGGCCTGACAACATTTCGAGACCCTGACTTACTCGAAGAACCCAGCGCTGCTTCCCTCTTCTATAGAGCTCCTGAATGCCGGGACCCACGAAGGCCAATTACACAACAATCAGACGTCTACAGCTTTGGTGTTCTCCTCTTGGAGCTCCTCACTGGGAAGACACCTTTCCAAGACCTCGTCCAAGAAAACGGTGCTGATATCCCTCGGTGGGTCCGGTTGGTGCGGGAAGAAGAGACGGAGTCTGGGGAGGACCCTACCTCAGGGAATGAGGCGTCAGAGGAGAAACTTGGGTCACTTTTGAACATTGCGATGGCTTGTGTCGCGCTTGTGCAGGAGAACCGGCCTATAATGAGGGATGTTTTGAGAATGATCAGGGATGTGAGGGCAGAGGCTCAGGTATCTTCAAACAGCAGTGACCATTCCCCAGGGAGGTGGTCGGATACTGTCCAGAGCTTGCCGAGAGAAGAGCATTTGAGCATTTGA 1992 0.496 MEPLICSSRYFLLLLFLSLVSVLPLARSGDAEVLLTLKSLLDPSNSLPWQEGSDFCKWKGIKECTGGRVTKLVLEYLNLSGTLDKKSLNQLDQLRVLSFKGNSISGEIPNLSGLVNLKSLFLNDNKFTGHFPTSISGLHRLKVVVLSGNQISGEIPASLLKLRRLYVLYLQNNRLTGEIPPLNQTSLRYFNVSNNQLSGQIPLSPTLIRFNYSSFSNNLNLCGEQIQKPCNGFPPSISPEPPVKVPSSSSKHKKRRKLIKIIAGSIAGFILLLICFCLLWRVCKKRRRRLREVRNKGVGIEGGAGGEASGIGGGGGGGGGGNGGKQGGFSWEGEGLGSLVFCGAGDQQMNYSLEDLLKASAETLGRGTIGSTYKAVMESGFIVTVKRLRDSRYPGLDEFRRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLATGLVYLHQTPGLTHGNLKSSNVLLGSDFESCLTDYGLTTFRDPDLLEEPSAASLFYRAPECRDPRRPITQQSDVYSFGVLLLELLTGKTPFQDLVQENGADIPRWVRLVREEETESGEDPTSGNEASEEKLGSLLNIAMACVALVQENRPIMRDVLRMIRDVRAEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02071 663 SUPERFAMILY Protein kinase-like (PK-like) 362 639 IPR011009 -
Eupl04g02071 663 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
Eupl04g02071 663 SUPERFAMILY L domain-like 29 223 - -
Eupl04g02071 663 Gene3D Phosphorylase Kinase; domain 1 341 433 - -
Eupl04g02071 663 MobiDBLite consensus disorder prediction 635 663 - -
Eupl04g02071 663 Pfam Leucine rich repeat N-terminal domain 29 61 IPR013210 -
Eupl04g02071 663 Gene3D Transferase(Phosphotransferase) domain 1 434 651 - -
Eupl04g02071 663 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Eupl04g02071 663 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 635 IPR046959 -
Eupl04g02071 663 ProSiteProfiles Protein kinase domain profile. 358 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g02071 663 Pfam Protein kinase domain 361 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g02071 663 FunFam Nuclear pore complex protein NUP107 27 181 - -
Eupl04g02071 663 Gene3D Ribonuclease Inhibitor 184 232 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02071 Eupl-Chr4 49715914 49722565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02071 7 663 Receptor kinase-like Gene Family AT1G60630 62.763 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl04g02071 Pkinase 5.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02071 - - nnu:104592464 978.393