Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02068 ATGGATCAGTTCCAGCCAATTCTCTCCGCCACCGTCACCTACGTCTCCTCTCTCCCTATCTCCACCACCCTCGCTGTCGTCGCGTCGGCCATCGCCTTCTTTCTCCTCCCCATCATCTTCCGCCGTCGAAACTGGTCCAACGCCCCACCAGGTCCCATCGGATGGCCCATCCTTGGCTACCTCCCTTACCTCACCGATCGCCTCCATGAAGACCTCTTCCACCTTGCCAAGACACATGGCCCACTCTTCAGCCTCCGAATGGGCCAGAAGCCCGCCATTGTTGTATCCTCACCGGAGATTACCCGGGAAATTCTCAAGCACAAGGATGCGACGTTCTCCAGCCGTACGATCACTGAGGCTGTACGATGTGTAACGTATGATGCAACGTCCCTCGTCTTTGTTCCCTACGGTGCCAGGTGGCGGCTGCTCCGTAAAATTTTGACGACCGAGATCTTCTCTACCAAGTCCATGGAGCTCTTCCAACCGGCTCGCAGACAACAGGTCCAGAGCCTACTAACCAAACTATACTCTGCATCAAAGTCCAAGACACCAGTGAACATTGCAGACTCCATGTTTGTCGTCTCAACCAACATCATTAGCAACTTGGTATGCTCCAAGACCCTATTCGATAGCACAAAGAAGGAAGGAAGAGAGCTCAAAGAGATGGTCTGGGAGGCCCTAGAGGTTGTAGGTTCACCAAACCTAGCTGATCTCATCCCATTTTTGAAACTATTTGACCCACAAGGATTGAAGAGGAGACTTCAGAAGGTGGCGAATAAGTTCGACAACTTCTTCGAGAAGTTGATCGACGAGAGGCTGGAAGAGAAGAAGAGAGGTTTGAAGATGAACGAGAATGGGAGGTTGGACATGTTGGATGTGTTCTTGGATTATCGGAGCGACAAGAAGGATGACGAGTTGAGGCAGTTCTCTAGGGTTGACATCAAAGGAATGCTTGCGGACATGTTTATTGCTGGTGCAGACACTACTTCCAGCACAGTAGAATGGGGAATGGCTGAAATCCTCAGAAATCCAGAAATCTACAAGAGGATACTCGTCGAGCTCGACCAAGTAGTTGGAAAGAACCGATTCGTCCAAGAAGCTGACATCCCTAAGCTCACCTACTTCCAAGCCGTGGTCAAAGAAGTATTCCGGCTCCACCCGGCAGTTCCACTCCTCATCCCTCGTCGCACAGACCAAGCTTGTGAGGTGTGTGGTTACTATGTGCCTAAGCATGCCATTGTCTTTGTGAACGTCTGGGGAATGACTAGGGACCCCAAGGTGTGGCCCGAGCCTTGCGAGTTCAAACCTGAAAGGTTCCTCGGGTCCGAGATCGATGTGAAGGGTCAAGATTTCGAGATCTTACCTTTCGGGACGGGGAGGCGATCGTGTGTCGGCATGCCTCTTGGTCACCGTATGGTGCATTATTCCTTAGCATCGTTGCTTCATGCTTTTGAGTGGGACTTTCCTGCGGATATCTTAGAAGACACGACGGAGAAGGTCGGGATTACTCTTCAGAAAGCCAAGGTCTTAGTCGGCATTCCGAAACCTCGCCTATCAGATTCTGTCTACCATTCGCATTAA 1581 0.5117 MDQFQPILSATVTYVSSLPISTTLAVVASAIAFFLLPIIFRRRNWSNAPPGPIGWPILGYLPYLTDRLHEDLFHLAKTHGPLFSLRMGQKPAIVVSSPEITREILKHKDATFSSRTITEAVRCVTYDATSLVFVPYGARWRLLRKILTTEIFSTKSMELFQPARRQQVQSLLTKLYSASKSKTPVNIADSMFVVSTNIISNLVCSKTLFDSTKKEGRELKEMVWEALEVVGSPNLADLIPFLKLFDPQGLKRRLQKVANKFDNFFEKLIDERLEEKKRGLKMNENGRLDMLDVFLDYRSDKKDDELRQFSRVDIKGMLADMFIAGADTTSSTVEWGMAEILRNPEIYKRILVELDQVVGKNRFVQEADIPKLTYFQAVVKEVFRLHPAVPLLIPRRTDQACEVCGYYVPKHAIVFVNVWGMTRDPKVWPEPCEFKPERFLGSEIDVKGQDFEILPFGTGRRSCVGMPLGHRMVHYSLASLLHAFEWDFPADILEDTTEKVGITLQKAKVLVGIPKPRLSDSVYHSH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02068 526 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 CDD CYP76-like 76 514 - -
Eupl04g02068 526 Gene3D Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Eupl04g02068 526 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 37 516 - -
Eupl04g02068 526 Pfam Cytochrome P450 49 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 SUPERFAMILY Cytochrome P450 49 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl04g02068 526 FunFam Cytochrome P450 82C4 40 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02068 Eupl-Chr4 49635274 49646338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02068 22 521 Cytochrome P450 AT4G12300 39.243 5.00e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02068 - - nnu:104594156 881.708