Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02008 ATGGGGAGTTGTGGAAGGAATGGAGCTGTAAGACAGTATATCAGGTCAAAGGTTCCTCGTCTTCGATGGACTCCTGATCTTCATCACTGTTTTGTTCATGCCATTGAAAGGCTTGGAGGCCAAGAGAAAGCTACACCTAAGCTTGTTCTTCAGCTAATGGATGTGAGAGGGCTAACTATTTCACATGTCAAAAGCCATCTTCAGATGTACAGAAGCATGAAGACTGACCTGAGAAGACAAGATTTGCTTCCCACTCAACAAAGAAAACACTCTTTTGATGATCATGATGATGGGTGTGTTGATGAGGAAAATGATGTGGGTTTTTTCCCATCTTCAGAACCCATTAAGATTCCAACCCTCAGTCCATTTACAGCAATCTCCCTTCAAAAAGGTTAG 396 0.4242 MGSCGRNGAVRQYIRSKVPRLRWTPDLHHCFVHAIERLGGQEKATPKLVLQLMDVRGLTISHVKSHLQMYRSMKTDLRRQDLLPTQQRKHSFDDHDDGCVDEENDVGFFPSSEPIKIPTLSPFTAISLQKG* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02008 131 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Eupl04g02008 131 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Eupl04g02008 131 FunFam Myb family transcription factor 17 75 - -
Eupl04g02008 131 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 73 IPR006447 GO:0003677
Eupl04g02008 131 Gene3D - 18 75 - -
Eupl04g02008 131 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 87 IPR046955 GO:0003700
Eupl04g02008 131 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02008 Eupl-Chr4 47630271 47631354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02008 1 77 G2-like Transcription Factor Family AT1G14600 68.293 3.38e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl04g02008 Myb_DNA-binding 5.3e-07 CL0123