Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01994 ATGGCACCTGTCGGATTACCTCCAGGTTTTAGGTTTCATCCCACCGACGAAGAGCTCGTGAATTATTATCTCAAGAGGAAAATCCATGGCCTCAAGATTGAGCTTGACATAATTCCTGAAGTCGATCTTTACAAATGCGAACCATGGGAGTTAGCAGATAAATCGTTCTTGCCAAGTAGAGATCCTGAATGGTATTTTTTTGGACCTCGGGATCGAAAATATCCGAATGGATTCAGGACGAACCGGGCGACACGAGCCGGATACTGGAAATCGACTGGGAAAGATCGGAGAGTTAGTTGTCAGAATCGAGCGATTGGAATGAAGAAGACATTGGTCTATTACAGAGGCCGAGCTCCTCAAGGGATCAGAACAGATTGGGTGATGCATGAATATCGCCTCGACGACAAAGAATGCGAAGACACCTTGGGAATTCAGGATTCTTATGCATTATGTCGCGTTTTCAAGAAGAATGGTGCATGCTCCGAAATCGAAGATCAAGGGCAATGTAGTTTATCGTTGGTCGAGAGCTCCCAAGGGATTATCAATGATTATGAAACCATGTCACCAGATGTGCCTGTAGGATCATCAGGGTGTATGGATGAGGACGACAAAGACGACGCATGGATGCAGTTCATCACTGAAGATGCATGGGGTTCCAATGCTGCTTTAGGTGGTGAAGACGCATCTTGCGTGGGATTCACACATTAA 708 0.4576 MAPVGLPPGFRFHPTDEELVNYYLKRKIHGLKIELDIIPEVDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTLGIQDSYALCRVFKKNGACSEIEDQGQCSLSLVESSQGIINDYETMSPDVPVGSSGCMDEDDKDDAWMQFITEDAWGSNAALGGEDASCVGFTH* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01994 235 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 170 - -
Eupl04g01994 235 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Eupl04g01994 235 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Eupl04g01994 235 FunFam Nac domain-containing protein 86 15 159 - -
Eupl04g01994 235 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Eupl04g01994 235 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01994 Eupl-Chr4 47234509 47237426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01994 1 225 NAC Transcription Factor Family AT3G17730 75.519 2.21e-129 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl04g01994 NAM 1.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01994 - - msin:131236959 464.151