Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01993 ATGGCACCTGTGACATTGCCTCCTGGTTTCAGATTCCATCCAACCGACGAGGAACTTGTTGCTTATTATCTCAAGAGAAAGATCAACGGCCGGAAGATCGAGCTGGAGATCATCCCTGAAGTCGATCTCTACAAATGCGAGCCATGGGAATTACCAGAGAAATCATTTTTACCAAGCAAAGATCTTGAGTGGTATTTCTTTAGTCCTCGTGATCGGAAGTATCCTAATGGGTCGAGGACAAATCGTGCAACTCAAGCTGGTTATTGGAAAGCCACTGGAAAAGATCGAAAGGTGAACTCCCAGATGCGTGCTGTGGGGATGAAGAAGACCTTAGTCTACTACCGAGGACGAGCACCTCACGGTGCTAGAACTGGTTGGGTTATGCATGAATATAGGCTCGACGAAAAAGAATGTGAAAGTGCGACGGGCTTACAGGATTCTTATGCACTATGTCGTGTCTTTAAGAAAAGCACAACTGTTCCTAAGACCGAAGAGCAATATGGTACTTCGTTCGTTAACCACCATCAATGGACTCCTAATAATCACTCATCTACCATTGAACTATCTGCTGAAGGAAGAGGAGAAGATTTCGAGAGCTCTGGTTATCCTTTTCCATCAGAAACATGCTCGCTCAATGTCAATCAAGGTGCTTCATTTGATATTAATGGTATAAGAGATGGGAAATGGATGCAATACTTGACAGAAGAGGCATTTAGCTCCACAACTCCAGCATTTCCAAGCCATGGTAGCCTTTTACCATCAAAGGTTGATATAGCACTGGAGTGTGCAAGGTTGCAGCATCGGCTCTCATTGCCTCCATTGGAGGCGGAGGACTTTCCTCAAGTCGACTTCAATGATTCGAAATTGCCGCAATCTGGACCCTTTCGTGAAAACACTAATGGGGTAGACATTTTGCAGGAAATCCTTTCAGTTGCTTGTGTCTCTCAGGAACTAATAAATCGACCCAATTATCAGGATACGTGGCCAGGAAATTATTCTTATTTGGATGAATTTGCAACTCTACCTGAAATAGAACGAATCGAAGAAGCTCAACATCGTCAATTTGGCGACATCGGTTTCTCTAGATCTATTGAGAAACCATGGGGAGCTGAACAGACAAGGTTTATAGACATCAGTGATTTGGAAGAGGAGTTCAAGACTGAGAGGATGGTAGAGAACTTGCGAGGGGTGGGAATGTCAAGCAAAGATCTAGAGAAGAACCTGTTGGAAGAACACAAGACCGTCGTCCCCATAGAAAACATTTCAAATTTCCTAAGAAGAGAGGGACAAGACTTTAATGGAGAGAGCAATCAACATAATGACTACAGGGACTTCATCAATGACACTGAGGAAAATGATTTCTCACTCGATTTCGTCAACGATGATCCAAATGGGATCTTTTCAGAAGAGGGGGGTGTCGATGATTTTTCCAGTACCCCAACGTTTGAAGTTTATGAGAAAGTAGAAGTTAATCATGGAATGTTTGTTTCGAGCCGTCAGGTAGCCGAGACATTATTTCACCAAATGGAGCCTTCAAAGACTGTTAAGGTTTATCTGAATCAGGTAATGGTACCTAACTTCCCAATTGCAAAAGAGAACAATATAACTAGAGTTCAAAATCGAAGTTCATTCTTTAGCAAGTTCAAGGCATTTGCAAGAGAGAAGTTCATGGGGATCACCAACTCCATGAAGCCATGGAAGGGTTCAAGCCTAATAAGTGAAGCAATGAATGCCATTTTTTACATAGTTGCACTTATATTGACATCTTGCAACGATCTCGGGGAACATACGGAGACTGTTAAATTGAGAGATGATTCCTCTACTACTGGCAAATTCGTGATGGAGAAAAGAGAGGAAAGTTTCTCACCTCAGGCCAGGAAGATGAAGAAACTGGGAAGAGTTAAATGGAGTGATAAGAAGGATAATGTTTGGTTTACTAACTTCAAGGGAGGACGCATTTCTAGTGTTTTTTTTAACAAGAAATGCCCTTTCTTCGCCATTGCTTTGGCTCTCTTTGCCTTTGGGTTTCACAATGTACCTTGCTCTATGTCATTATGGTTCCATTCTTTTTATCCACTGTAA 2082 0.4227 MAPVTLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWELPEKSFLPSKDLEWYFFSPRDRKYPNGSRTNRATQAGYWKATGKDRKVNSQMRAVGMKKTLVYYRGRAPHGARTGWVMHEYRLDEKECESATGLQDSYALCRVFKKSTTVPKTEEQYGTSFVNHHQWTPNNHSSTIELSAEGRGEDFESSGYPFPSETCSLNVNQGASFDINGIRDGKWMQYLTEEAFSSTTPAFPSHGSLLPSKVDIALECARLQHRLSLPPLEAEDFPQVDFNDSKLPQSGPFRENTNGVDILQEILSVACVSQELINRPNYQDTWPGNYSYLDEFATLPEIERIEEAQHRQFGDIGFSRSIEKPWGAEQTRFIDISDLEEEFKTERMVENLRGVGMSSKDLEKNLLEEHKTVVPIENISNFLRREGQDFNGESNQHNDYRDFINDTEENDFSLDFVNDDPNGIFSEEGGVDDFSSTPTFEVYEKVEVNHGMFVSSRQVAETLFHQMEPSKTVKVYLNQVMVPNFPIAKENNITRVQNRSSFFSKFKAFAREKFMGITNSMKPWKGSSLISEAMNAIFYIVALILTSCNDLGEHTETVKLRDDSSTTGKFVMEKREESFSPQARKMKKLGRVKWSDKKDNVWFTNFKGGRISSVFFNKKCPFFAIALALFAFGFHNVPCSMSLWFHSFYPL* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01993 693 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Eupl04g01993 693 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 200 - -
Eupl04g01993 693 FunFam Nac domain-containing protein 86 15 159 - -
Eupl04g01993 693 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Eupl04g01993 693 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Eupl04g01993 693 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01993 Eupl-Chr4 47227507 47232256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01993 1 520 NAC Transcription Factor Family AT1G65910 49.245 6.17e-151 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl04g01993 NAM 5.3e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01993 - - nnu:104606948 929.472