Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01990 ATGTCGAAGGACGACGCAATCCTGCTAGATTTCTGGGTGAGCCCATTTGGCATGAGAGCAAGGATCGCGTTGGCGGAGAAAGGTGTGGAGTATGAGGCAAGAGAGGAGGAGGATTTGTTGGGGAACAAGAGTGAGTTGTTGCTCAAATCCAACCCAATCTACAAGAAGGTGCCTGTGTTGGTACACAATGGCAAGCCTGTTTGCGAGTCGAGCATCATAGTTAGCTACATCGATGACGCCTTTCCTTCCCGACCTTTTCTCCCCACATGCCCCTACGACCGATCCGTGGCCAGGTTTTGGGCTGATTTCATAGACAAGAAGTTATTTGATGCGGGGAACAAGATATGGAGGAGCAAAGGAGAGGAGATAGAGGTGGCTAAGAAAGAATTCATAGAGATTTTGAAGCTGCTAGAGGGAGCTCTAGGGGAGAAGGATTTCTTTGGTGGTGACAACTTTGGGTTTGTAGACGTTATAGCGATCCCTTTTGCTTCTTGGTTCTATGCTTATGAGAAATTTGGAGGTTTCACTGTGGAGGATGAGTGCCCCAAATTCTCAGCTTGGATTAAGAAATGCATGGAGAGGGAGAGTGTTGCCAAATCTCTTCCTGATCCAACAAAAGTGTATGAGTTTGTTTGCATGTTTAGGAAGATGCAAGGCCTTGAGTAG 666 0.47 MSKDDAILLDFWVSPFGMRARIALAEKGVEYEAREEEDLLGNKSELLLKSNPIYKKVPVLVHNGKPVCESSIIVSYIDDAFPSRPFLPTCPYDRSVARFWADFIDKKLFDAGNKIWRSKGEEIEVAKKEFIEILKLLEGALGEKDFFGGDNFGFVDVIAIPFASWFYAYEKFGGFTVEDECPKFSAWIKKCMERESVAKSLPDPTKVYEFVCMFRKMQGLE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01990 221 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Eupl04g01990 221 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Eupl04g01990 221 Gene3D - 90 221 - -
Eupl04g01990 221 CDD GST_N_Tau 7 81 - -
Eupl04g01990 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Eupl04g01990 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Eupl04g01990 221 Gene3D Glutaredoxin 1 89 - -
Eupl04g01990 221 Pfam Glutathione S-transferase, C-terminal domain 122 189 - -
Eupl04g01990 221 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Eupl04g01990 221 FunFam Tau class glutathione S-transferase 1 89 - -
Eupl04g01990 221 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Eupl04g01990 221 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Eupl04g01990 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 209 IPR045073 -
Eupl04g01990 221 FunFam Glutathione S-transferase U20 90 221 - -
Eupl04g01990 221 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01990 Eupl-Chr4 47112349 47113294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01990 4 216 Glutathione S-transferase Gene Family AT1G78380 63.551 2.05e-94 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01990 K00799 - psom:113302733 350.903