LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl04g01980	ATGGATCCTATCAACCAAGTCACCCACGACTTCTCTCCTTTCTTCAGAGTGCACAAAGATGGACGTGTCGAGGATCTATTTGGTGCCAACATGGTCCCACCACCACCGCTTGATCACCAGCTGATTGGTGTTTCATCCAAAGACGTTCTCGTGCTGCCCGATGCTTCTGTCTCTGCCCGAATTTATCTTCCAAAGATCGTCGACACTCGTCGGAGACTTCCCGCAGCCCCACAACACCCTTTGCCAACGGCCTATGATGATTCATGGGCCGTTCTCAAATGGGTGGTGGCCCACAATGATGGTGTGGGACCTGTGGGTACTGAGACCTGGCTATTGGATTATGCTGATTTTGATCGAGTCTTTGTTGGAGGAGATAGTGCGGGAGCCAACATCGCTCATCATCTGGCGATGCGTGCTGGCCCCATTAAGATCTATGGTGCTATTCTAATCCACCCTTACTTCTGGGGGACCGAACCGATCGGGTCTGAGTCAGAGTATCCGATGGTGATATCAATTATAGATCGTATGTGGCGGTTCACGTGTCCTTCATCGAAAGGTTCCGATGATCCACTTATCAATCCGATGGGACCCGATGCACCAAGTTTGAAGGGCCTGGGCTGCACAAAAGTTCTGGTGTGCGTCGCGGAGAAAGACATATTAAGGGAGAGAGGGTTGTTTTACCATGAAACGCTAGTTGGGAGTGGATGGGGAGGAGATGCGGCCCTACTGGAAATTAAAGGGGAGGGCCATGTGTTTCATCTGGTGAACCCTACTTGTGAGAATGCAATGATCATGATGAAACACTTGGCTTCCTTCCTGAACAGTTCGATTAACGCTTGA	840	0.5036	MDPINQVTHDFSPFFRVHKDGRVEDLFGANMVPPPPLDHQLIGVSSKDVLVLPDASVSARIYLPKIVDTRRRLPAAPQHPLPTAYDDSWAVLKWVVAHNDGVGPVGTETWLLDYADFDRVFVGGDSAGANIAHHLAMRAGPIKIYGAILIHPYFWGTEPIGSESEYPMVISIIDRMWRFTCPSSKGSDDPLINPMGPDAPSLKGLGCTKVLVCVAEKDILRERGLFYHETLVGSGWGGDAALLEIKGEGHVFHLVNPTCENAMIMMKHLASFLNSSINA*	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl04g01980	279	Pfam	alpha/beta hydrolase fold	75	253	IPR013094	GO:0016787
	Eupl04g01980	279	SUPERFAMILY	alpha/beta-Hydrolases	13	275	IPR029058	-
	Eupl04g01980	279	Gene3D	alpha/beta hydrolase	66	278	IPR029058	-
	Eupl04g01980	279	PANTHER	ARYLACETAMIDE DEACETYLASE	76	262	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl04g01980	Eupl-Chr4	46900396	46901357	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl04g01980	5	274	Carbohydrate Esterase	AT3G48700	38.602	6.22e-68	212

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl04g01980	-		-	nnu:104605858	301.212