Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01977 ATGGCTGATGCGGAGAAAGATGAGATACCCATGCTATTGGGTATGGATGTTGAACTACAAAGGTTTACAGCCAGGAATCGTAGTGCATCAATGTCCATGCCTATGCATTCCATGGATTCATATGAAAGTGAAAATCACCTTGTATCTCATACTGGTCCTTTGCGGAGTGAAAGAAGAACTCCTTTCACACATATGAGTGGTCCATTATATGTTAGTCGGAAACCTGATAACCTTGTCTGGCCTATGCAAGGGATGATGGTCCCCACAACACCCGCTCTCATGGCAGAAGAATACCCTTCATATAATGGAACGGATCAAAAAGATTGGCCTGATGGCAACTTTACTGGCAAGAATGAACATTTATTGAGGTCTGGGCAGTTAGGGATGTGCAATGATCCTTACTGCACAACATGCCCATCATATTATAATTTCAAAGCACAACAAAGGAACTCAAAAACTTCGTCTCTATTTGACTCGAAGTTCCATAATGTTCTCTATGGAGATGCTAAAGGTTGGGCAAGGAGATCGTTTTCCTCTCTACGTTCACACGTTCCTGGCATCATGAATCCTCATGCTAAAGTTGTTCAACAATGGAACAAATTTTTTGTCATTTCTTGCTTGGTGGCGATTTTTGTAGACCCTTTGTTTTTTTTCTTACTATCTGTTCAAAAGGAGAATAAATGCATAGTTCTTGATTGGCCATTGGCAACAGCTATTGCAGTTGTGAGAAGCATAACCGATTTCATTTACCTAATGCATATGCTTCTTCAGTTTAGGCTGGCTTATGTTGCTCCTGAATCTAGAGTGGTGGGTTCTGGAGATTTGGTTGACCATCCGAAGAAAATTGCTCTCAATTACCTTTCTGGCTACTTTCTAATTGATGTATTTGTTGTATTACCACTTCCACAGATAATGATATTGTTAGTCTTACCTAAGTATGTGGGATCGTCAGCCGCAAATTATGCAAAAAATCTCTTACGGGCAACAGTTCTTCTTCAGTATATACCCAGGTTTTTCAGGTTTCTGCCTTTGCTTGCTGGTCAGTCTGCAAGTGGCTTCATATTTGAGTCAGCATGGGCAAACTTTGTTATTAATCTTCTCATTTTTGTACTGGCTGGGCATGTCGTGGGGTCATGCTGGTACCTTTTTGGATTACAGAGGGTAAATCAATGTCTTCGAGAGGCATGCACTGACTCTCTTTTGGAAGAATGTAAAAAATTCATAGACTGCGGGCATGGCAATGATATTAATACTTTTAAGTTATCCCCAGACTGGAGCAAATGGCAAAGCAATCTAAATGCTAGTGACTGCTTCAACACAAGTGGTCGTTTTCCTTATGGGATCTATGAGCAAGCTGTTAATATTACCACTAAACGTAGTATCATTACAAGATATATATATTCTTTGTTTTGGGGTTTCCAGCAAATCAGTACTCTTGCTGGAAATCAAGTTCCTAGTGATTTTGTATGGGAAGTTCTCTTTACTATGGGCATCGTCGGACTTGGGCTGTTGCTTTTTGCTTTACTCATTGGAAATATGCAAAACTTTCTCCAAGCTCTTGGACGGAGGAGATTAGAGATGCAACTAAGGCGTCGTGATGTTGAGCAATGGATGAGTCATCGACGCTTGCCAGGAGAACTTAGAAGGCTAGTTCGACAATCAGAACGGTTTAATTGGGCTGCCACACGAGGTGTAAATGAAGAAGTGCTACTCGAAAATTTGCCCGAGGACCTACAAAGAGAAATACGTCGCCATCTCTTTAAATTTGTCAAGAAAGTCCGGATTTTGGCTCTAATGGAGGATCCAATCGTAGATGCCATCTGTGAAAGATTAAGACAGAAGTTATACATAAAGGGAAGCAAAATTCTATATGTTGGAGGTCCAGTTGACAAAATGGTTTTTATTGTGAGGGGGAAAATGGAGAGTGTTGGAGCAGATAGGAATATAGCCCCCTTGTCAGAAGGGGACATTTGTGGTGAGGAGCTTCTTACGCGGTGTCTTGAGCACTCTTCAGTGAACAAAGATGGAAGGAAAATCAGGATCCCAGGACAGCGATTACTTTCCAACAGGATGGTGACGTGCTTAACTAATGTGGAAGCATTTTCCCTCCGAGCTGATGACCTGGAGGAAGTCACTGCCGTTTTTGCAAGGTTCCTGAGGAACCCACGTGTTCAAGGAGCCATAAGGTACGAATCACCCTATTGGAGAGGACTCGCAGCAATGCGCATTCAAGTAGCATGGAGATACCGGAAGAAGCGTTTAAATCGGGCAGACACCTCTAAGCATGAATCCGGTCACCCATCGAGGTAA 2310 0.4216 MADAEKDEIPMLLGMDVELQRFTARNRSASMSMPMHSMDSYESENHLVSHTGPLRSERRTPFTHMSGPLYVSRKPDNLVWPMQGMMVPTTPALMAEEYPSYNGTDQKDWPDGNFTGKNEHLLRSGQLGMCNDPYCTTCPSYYNFKAQQRNSKTSSLFDSKFHNVLYGDAKGWARRSFSSLRSHVPGIMNPHAKVVQQWNKFFVISCLVAIFVDPLFFFLLSVQKENKCIVLDWPLATAIAVVRSITDFIYLMHMLLQFRLAYVAPESRVVGSGDLVDHPKKIALNYLSGYFLIDVFVVLPLPQIMILLVLPKYVGSSAANYAKNLLRATVLLQYIPRFFRFLPLLAGQSASGFIFESAWANFVINLLIFVLAGHVVGSCWYLFGLQRVNQCLREACTDSLLEECKKFIDCGHGNDINTFKLSPDWSKWQSNLNASDCFNTSGRFPYGIYEQAVNITTKRSIITRYIYSLFWGFQQISTLAGNQVPSDFVWEVLFTMGIVGLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEQWMSHRRLPGELRRLVRQSERFNWAATRGVNEEVLLENLPEDLQREIRRHLFKFVKKVRILALMEDPIVDAICERLRQKLYIKGSKILYVGGPVDKMVFIVRGKMESVGADRNIAPLSEGDICGEELLTRCLEHSSVNKDGRKIRIPGQRLLSNRMVTCLTNVEAFSLRADDLEEVTAVFARFLRNPRVQGAIRYESPYWRGLAAMRIQVAWRYRKKRLNRADTSKHESGHPSR* 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01977 769 Gene3D Jelly Rolls 593 717 IPR014710 -
Eupl04g01977 769 CDD CAP_ED 595 711 IPR000595 -
Eupl04g01977 769 Gene3D Helix hairpin bin 522 587 - -
Eupl04g01977 769 SUPERFAMILY cAMP-binding domain-like 523 717 IPR018490 -
Eupl04g01977 769 Gene3D - 199 520 - -
Eupl04g01977 769 SUPERFAMILY Voltage-gated potassium channels 193 518 - -
Eupl04g01977 769 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 130 758 - -
Eupl04g01977 769 Pfam Ion transport protein 198 523 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl04g01977 769 ProSiteProfiles cAMP/cGMP binding motif profile. 595 663 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01977 Eupl-Chr4 46772152 46838106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01977 5 673 Ion Channels AT3G17700 63.072 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01977 K05391 - tcc:18587138 1137.87