Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01955 ATGGTACTCTCCAAGACAGCGTCGGAGTCCGATGTCTCCGTTCACTCTACGTTCGCTTCGCGATACGTTCGAGCTTCCCTTCCGAGGTTCAAGATGCCTGAGAATTCCATCCCTAAGGAGGCAGCGTACCAGATCATCAACGACGAGCTGATGCTCGACGGGAACCCGAGGCTGAACCTGGCTTCCTTTGTGACAACTTGGATGGAGCCCGAGTGCGATAAACTCATCATGGCTGCCATTAACAAGAACTACGTCGACATGGACGAATACCCCGTCACTACCGAACTCCAGAACCGATGCGTAAACATAATCGCGCATCTCTTCAATGCCCCACTTGGAGATTCAGAGGCGGCTGTTGGAGTGGGGACGGTGGGGTCATCGGAGGCTATAATGCTTGCTGGACTCGCATTCAAGAGAAAGTGGCAGAACAAAAGGAAGGTCGATGGCAAGCCTTGGGACAAGCCTAACATCGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAGGTGGAACTTAAAGAGGTGAAACTGAGGGAGGGGTACTATGTGATGGACCCAGTGAAAGCGGTCGAGATGGTGGACGAGAACACTATCTGCGTCGCTGCTATCCTGGGTTCGACCCTCAACGGAGAATTCGAAGACGTTAAGCTCTTGAACGATCTCTTGGTGGAGAAGAACAAGGAAACCGGATGGGATACGCCGATCCATGTAGATGCCGCTAGCGGTGGATTCATCGCACCGTTCCTTTACCCGGAACTGGAGTGGGATTTCCGGCTACCATTGGTCAAGAGCATCAATGTTAGCGGCCACAAGTATGGACTTGTCTATGCGGGTATCGGGTGGGCCATCTGGAGGAACAAAGAAGACTTGCCTGAAGAGCTTATCTTCCACATCAATTACCTCGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCTAAAGGTTCCAGTCAAGTTATTGCTCAGTACTATCAACTAATTCGCTTGGGTTTCGAGGGGTACCAAAATATAATGGAGAATTGCCGAGAAAATGCAATCGTGCTGAAAGAAGGATTGGAAAAGAGTGGGCGGTTCAACATTGTGTCCAAGGACAATGGGGTTCCCTTAGTCGCATTCTCCCTCAAGGACAACAGCCGTCACAATGAATTCGAGGTGTCGGACATGCTGCGAAGATTTGGATGGATTGTACCAGCCTACACGATGCCTGCCGATGCACAACATGTGACAGTGTTGCGCGTTGTCATAAGAGAGGACTTTTCACGCACCCTCGCCGAGCGACTTGTCATCGACATCGAAAAGGTCCTGCATGAGCTCGATGCCTACCCTGCTAAACTCAGTGCGAAGACGTCAATCACTTGTGAGCAGAAGATTGAGAACAATGTCGTCGTCGTCAAGAAGACTGCTTTGGAGACACAGAGGGAGATCACCACTGCCTGGAGGAAGTTTGTCATGGCTAAGAAGACCGGCGTATGCTAG 1494 0.5087 MVLSKTASESDVSVHSTFASRYVRASLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNIIAHLFNAPLGDSEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKVDGKPWDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWAIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYQNIMENCRENAIVLKEGLEKSGRFNIVSKDNGVPLVAFSLKDNSRHNEFEVSDMLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAERLVIDIEKVLHELDAYPAKLSAKTSITCEQKIENNVVVVKKTALETQREITTAWRKFVMAKKTGVC* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01955 497 FunFam Glutamate decarboxylase 66 360 - -
Eupl04g01955 497 FunFam Glutamate decarboxylase 361 448 - -
Eupl04g01955 497 Gene3D - 66 360 IPR015421 GO:0003824
Eupl04g01955 497 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Eupl04g01955 497 Gene3D - 1 65 - -
Eupl04g01955 497 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Eupl04g01955 497 FunFam Glutamate decarboxylase 1 65 - -
Eupl04g01955 497 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Eupl04g01955 497 Gene3D - 361 448 - -
Eupl04g01955 497 PANTHER GLUTAMATE DECARBOXYLASE 1 497 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01955 Eupl-Chr4 46143317 46150462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01955 1 497 Calmodulin-binding Proteins AT5G17330 85.259 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01955 K01580 - msin:131227352 931.013