Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01945 ATGAATATAGATCTCGAACGTCGTCCGGGAGAAGGCGATATGGATGAGCAAGGGAGGGATCCCACCATAGCAAAAGATGACGTTGAAGAACCTAGTGGCGGTGTATATAAGGTGGTGGATGGTGGAGATGATAATGTGAATGGTGGGGATAGAATGGATGTGAATGTGAACTCTCCCATGAGGGATTCTTCCACTGTTGTTGTTTTTGAAGGAGGTGGCGATGCAAACGTAGAGCCCCTTGAGGGTATGGAGTTTGAATCTCATGAGAAAGCTTTTGAATTCTACAAAGAGTATGCCAGGCGTGAGGGGTTCGGTGTCTCCAAAAGAAATAGCCGTCGTTCAAGGAAATCTTATAAATTTATTGATGCGAAATTTGCGTGTTGTAGATATGGAATCAAACAAGCAAGTGAAAAAGTGAGCAATCCAAGGCCTACTGCAAAGATAGATTGTAAGGCGGCTATGCATGTGAAGAGAAGGACGGATGGAATATGGTATGTACATTCTTTTATTAAAGAGCATAACCACGAGCTTCTGCGAGAGCAAGTGCATTATTTTCGATGCCATAGGGGTACCAATCCAAACAAGGAGAAGATCCGCAACTCACATGCTGTGGGAGGACAAATGGGTGAGATCAATTCTGCAACCCCCATACAATTTGGTGGATATAAAAATGTTCCGTGTCTTGAGGAGGACATCAGAAACGCGCTTGATAAAGGACGACTGGCTCCAGAAGTAGGAGATGCACAAGCTATGCATGAGTTTTTCATGCATATGCAGGAAGAGAACCCCAATTTCTTTTATGCATTGGATTTGAATGAAAACCAACATCTGAAAAATGTCTTCTGGGTTGATGCCAAGGGTAGGCATGATTATATTGATTTTGGCGATGTTGTTTCTTTTGATACTACATATGTCACAAACACGTATAAAATGCCAATTGCTCCATTTGTAGGAGTGAACCATCATGGGCAGTTCATGTTGCTTGGATGTGCATTAATTGCAGATGTGACTACATCAACATTTGTTTGGCTATTGAAGACATGGCTTAGAGCAATGGGTGGACAAGCTCCAAAAGCGATAATTACTGACCAAGACAAGGCCATAAAAGAAGCTGTTGCAGAGGTGTTCCCAGATTCCAAACATCGTTTTTGTTTGTGGCATATTACAAGAAAGATCCCCGATAAGCTTGGTCATGTAACCAAGCGACATGAAAATTTTATGGTTAAATTTAATAAATGCATCTACAGGTCATGTACAGATGAGGAGTTTGAAAAAAGATGGTGCAAAATGGTTGATAGATTTGAACTCAGAGAGGATGAATGGATTCAGTCATTGTATGAAGACCGCAAACAATGGGTGCCATCTTATATGAGAGATACATTTTTTGCTGGGATGTCTACATTGCAACGTAGTGAAAGTATACACTCTTTCTTTGACAAGTATGTGACGAGAAAAACCACTTTGAAAGAGTTTGTTGAGCAATATGAAGTAGCTTTACATGATAGGTGTGAAAAAGAAGCCCAGGCAGATTTTGAATCGTGGCAGACAATTCCGCCCTTGAAGTCTCCATCACCCTATGAAAAACAAATGTCATCCGTGTACACAAGAGAATTATTTAAGAAATTCCAAGTTGAAGTTATGGGAGCACATGCATGTCATCCTATAAAAGAAAAAGAAGATGGGGCAAACGTAGCATTTAGGGTGACAGACTTGGAGCAGCAACATGACTTTTCAGTGACATGGAACGAAACAGAATTGAATGTTTCATGTTCGTGTCTTACGTTTGAATTCAAAGGCTTTCTCTGTAGACATGCAATGATTGTTCTCCAATTTTCAGGTGTGTTCAACATCCCATCCCAGTATATATTGAAACGATGGACAAAGGATGCAAAGAATAGGCATACATTAAGTCAAAGATCTAATACAGTGCAATCTAGGGCTCAACGCTACAATGATCTTTGTAAACGAGCTATTAAATTAGCAGAAGAAGGTTCATTATCTCAAGAGAGCTACAATGCTGCATTGCACGCACTAGAAGAAGGAATTAAAAAATGTGTGGCTGAGAATGACTCTATTAAGAGTACTGCAAAGCCCAGATCATCAACAGCTCATAGCCTTCACAACATCGAAGAAAAGAAACAGAGTGATAGTGTGACTCCTATAGCAGGGGTGCTTGATCCTCAAGTCACCAAGAGAAAAGGGGGCCTTAAGAGAATACTACCTCGAATAGAGAAGACAAATAAAAAAAGACCAGATGAAAAGACAAATATACAGTTACAGCAAGAAGTACAAAGTGTTGGCATGCGAGAGACCTTACAAGGGACGGGACAAGCGGAATCAAGAGCACCAATGGTTGATAGTTATTATGGCACTCAAGAGAGCTTGCAAGGGATGGGACAATGGGGCCCTAGAGCACCAATTATTAATAGTTGTTATGGCACTCAAGATGGTTTGCAAGTGATGGGACAATGGGAGTCAAGAGCACCAGCAGTTGGTGGTTATTATGGAACTCAAGGGAACTTGCAATCAATGAGGAATGGATGA 2544 0.41 MNIDLERRPGEGDMDEQGRDPTIAKDDVEEPSGGVYKVVDGGDDNVNGGDRMDVNVNSPMRDSSTVVVFEGGGDANVEPLEGMEFESHEKAFEFYKEYARREGFGVSKRNSRRSRKSYKFIDAKFACCRYGIKQASEKVSNPRPTAKIDCKAAMHVKRRTDGIWYVHSFIKEHNHELLREQVHYFRCHRGTNPNKEKIRNSHAVGGQMGEINSATPIQFGGYKNVPCLEEDIRNALDKGRLAPEVGDAQAMHEFFMHMQEENPNFFYALDLNENQHLKNVFWVDAKGRHDYIDFGDVVSFDTTYVTNTYKMPIAPFVGVNHHGQFMLLGCALIADVTTSTFVWLLKTWLRAMGGQAPKAIITDQDKAIKEAVAEVFPDSKHRFCLWHITRKIPDKLGHVTKRHENFMVKFNKCIYRSCTDEEFEKRWCKMVDRFELREDEWIQSLYEDRKQWVPSYMRDTFFAGMSTLQRSESIHSFFDKYVTRKTTLKEFVEQYEVALHDRCEKEAQADFESWQTIPPLKSPSPYEKQMSSVYTRELFKKFQVEVMGAHACHPIKEKEDGANVAFRVTDLEQQHDFSVTWNETELNVSCSCLTFEFKGFLCRHAMIVLQFSGVFNIPSQYILKRWTKDAKNRHTLSQRSNTVQSRAQRYNDLCKRAIKLAEEGSLSQESYNAALHALEEGIKKCVAENDSIKSTAKPRSSTAHSLHNIEEKKQSDSVTPIAGVLDPQVTKRKGGLKRILPRIEKTNKKRPDEKTNIQLQQEVQSVGMRETLQGTGQAESRAPMVDSYYGTQESLQGMGQWGPRAPIINSCYGTQDGLQVMGQWESRAPAVGGYYGTQGNLQSMRNG* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01945 847 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 686 IPR031052 GO:0006355
Eupl04g01945 847 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
Eupl04g01945 847 MobiDBLite consensus disorder prediction 1 33 - -
Eupl04g01945 847 Pfam SWIM zinc finger 587 609 IPR007527 GO:0008270
Eupl04g01945 847 MobiDBLite consensus disorder prediction 1 48 - -
Eupl04g01945 847 Pfam FAR1 DNA-binding domain 93 178 IPR004330 -
Eupl04g01945 847 MobiDBLite consensus disorder prediction 693 721 - -
Eupl04g01945 847 SMART 26again6 588 615 IPR006564 GO:0008270
Eupl04g01945 847 Pfam MULE transposase domain 297 390 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01945 Eupl-Chr4 45747092 45770313 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl04g01945 MULE 6.8e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01945 - - psom:113298342 1139.41