Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01941 ATGGTGCAAATGCTTCTACTTGCTTTTCCAGGTGTTCTAATTTCGACCATTTGTCTTGGATCCGCTTTGAAGCTCGCTTTTCCTTTTAACTGGAGCTGGAAAACATCATTGTTGCTGGGGGGGCTTCTTAGTGCTACTGACCCTGTTGCTGTTGTGGCTTTGTTGAAAGAGCTTGGCGCGAGCGAAAAACTGAGTACAATAATTGAAGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTGTACCAGCTGTTCTATCAAATGGTCATTGGCCGGAGCTTTAGCGTGGGAGACATGGTCAAATTTCTCGTACGAGTTTCACTTGGAGCTGTAGGAATTGGACTTGCTTTTGGAGTGGCATCTGTACTGTGGTTGCGGTTTATTTTCAATGACACAGTGATAGAGATTGCGCTGACACTTGCTGTGAGCTACATTTCTTACTTCACTGCTCAAGATGGTGCTGACGTTTCAGGTGTCTTGACAGTTATGACTCTAGGGATGTTTTATTCTGTAGTTGCTAGGACAGCGTTTAAGGGTGATAGCCTACAGAGCTTACATCATTTCTGGGAAATGGTTGCCTACATTGCTAATACTCTAATTTTCATCTTAAGTGGAGTTGTTATAGCTGAAGGTGTTCTGCATAGTGATCATTTCAAGAATGATGGAACTTCATGGGGCTATCTTATTCTCCTCTATGTATTTGTTCAAATCTCTCGCATAATAGTTGTGGGAATATTGTATCCATCTCTACGATATTTTGGTTATGGCTTGGACTGGAAGGAAGCAACTATTCTTGTTTGGTCAGGTTTGCGGGGGGCTGTGGCATTGTCACTATCACTATCGGTTAAACGTGCTAGTGACAGCTCATTTTACATCAGCCATGAAACAGGAACTCTGTTTGTTTTCTTCACTGGTGGGATCGTATTCTTGACGCTCATTGTGAATGGATCTACTACACAGTTTATTTTGCATTATTTGGATATGAATAAGTTATCAGCGGCGAAGACACGGATATTGGACTATACAAGATACGAAATGATGAACAAGGCGCTAGATGCTTTTGGCAATCTTGGAGATGATGAAGAACTAGGACCTGCTGATTTGCCCACAGTGAAAAGATATATTGCATGCTTGAATTACCTGGAAGGTGGGCAAGTGCGCTCTCACTGTGAATCGGAAAGTAGGAATAATCTGGATCCTATGAATTTAAAAGATATACGAGTACGCCTTTTAAATGGTGTTCAAGCTGCTTACTGGGGGATGCTAGAAGAAGGAAGGATAGTCCAAACAACTGCAAATATTTTGATGCAGTCAGTTGATGAAGCAATTGATTTGGTTTCTGATGAGTTATGCGACTGGAAAGGTCTAAATGCCCATGTTCATTTTCCAAGTTATTATAGGTTCCTACAGATGAGCTGTCCACAAAAGTGGGTCACATATTTCATAGTGGAAAGATTAGAATCAGCATGTTACATATGTGCTGCATTTCTCCGTGCTCACAGAATTGCAAGGAGGCAACTGCATGAGTTTATTGGTGACAGTGCCTCTGCTGTCATTGATGAAAGTGAGAAAGAAGGAGAGGAAGCAAGAAATTTTTTGGAATATGTTCGCGTTACATTCCCCCAGGTTTTGCGTGTTGTGAAAACAAGACAAGTAACATATTCAATGCTAAAGCATTTGAGTGATTATGTGCAAAATCTTGAGAAGGTTGGATTATTGGAAGAGAAAGAGATGCTTCACCTTCATGATGCTGTGCAGACTGACTTAAAAAAACTTCTAAGAAATCCCCCCTTGGTAAAGATGCCAAAGATAAGTGATTTGTTAAGTGCACATCCTTTGCTGGGAGTTCTTCCTTCTATGGTCCCTGAGCCTCTTGAAAGTTCCACAAAAGAAATGGTGAAACTATGTGGCGTAACCCTCTACAGAGAGGGATCCAAGCCAAATGCAATATGTCTTATTTCAAATGGAGTGGTTAAGTGGGCAAGTAAGAGTTTGAGAAACAAGCATTCATTGCATCCAACGTTTTCTCATGGAAGTACATTAGGCCTGTATGAAGTACTAACTGGAAGGCCTTACATCTGTGACATGATTACAGATTCTGTTGTGCACTGTTTCTATGTTGAAACTGGAAAGATACTTTCAGTGCTAAGATCAGATCCTGCAATAGAAGATTTCTTGTGGCAGGAAAGTGCTATAGTCATTGCCAAACTCTTGCTTCCTCAAATATTTGAGAAAATGGCAATGCAAGAGTTGAGGGCTCTTGTTGTGGAACGGTCAATGATGAACATATATTTAAGGGGAGAAACTTTAGAGATATCACATCATTCCATTGGGTTTTTATTAGATGGATTTATAAAAACCCAAGATGTCCAAGAACTAATTACATCTCCGGCAGTACTGTTGCCCTCGTATGGAGATCTAGGCTTTCTCAGTTTAGAAACATCAGGTGTCAAGGCTGCAAGTTTCTGTCATCAAGGATCCTCGTATCAGATTGAGTCAAGAGCAAGGGTAATTAATTTTGACATGGCAGCATTTGAGGATGATGGGGGGCTCCAAAGAAGGCCGGCTTCATGGGTCTCGCATTCAATTGACCTCCAAAATAGAGAACATAGTGGTCTAATGAGTTGGCCCGAACCTTTGTACAAACCAAGACAACATCATCAGCACTCTGAGGGAACTGATCAACAAGCAAACAGTTTATCTGCAAGAGCAATGCAGCTGAGCATCTTTGGCAGCATGACGAATAACATCCGTAGGCGTATGCCAAGGAGATCTCAACATGAGCCATTGCACAGCCTGTCATATCCAACTGTTCCATCGGGGAGAATACATGATCGTCCACTTGTTTCTGCCCAATCAGAAGGAGCTGCTAGCCAAAGCCTTAGAGCAAAAGAGTTCACTAGACCAAACTTTAATCCCCCACAACCAAGTGGAAGCAAGAAAAAGAGTCGTGTCCAAGATGATTCAAGCGATGAATCGGATTACGACGATGAACTCATTGTGAGAATTGATTCCCCAAGTGGGCTTTCTTTTCGCCAGGCTTCATGA 3051 0.4182 MVQMLLLAFPGVLISTICLGSALKLAFPFNWSWKTSLLLGGLLSATDPVAVVALLKELGASEKLSTIIEGESLMNDGTAIVVYQLFYQMVIGRSFSVGDMVKFLVRVSLGAVGIGLAFGVASVLWLRFIFNDTVIEIALTLAVSYISYFTAQDGADVSGVLTVMTLGMFYSVVARTAFKGDSLQSLHHFWEMVAYIANTLIFILSGVVIAEGVLHSDHFKNDGTSWGYLILLYVFVQISRIIVVGILYPSLRYFGYGLDWKEATILVWSGLRGAVALSLSLSVKRASDSSFYISHETGTLFVFFTGGIVFLTLIVNGSTTQFILHYLDMNKLSAAKTRILDYTRYEMMNKALDAFGNLGDDEELGPADLPTVKRYIACLNYLEGGQVRSHCESESRNNLDPMNLKDIRVRLLNGVQAAYWGMLEEGRIVQTTANILMQSVDEAIDLVSDELCDWKGLNAHVHFPSYYRFLQMSCPQKWVTYFIVERLESACYICAAFLRAHRIARRQLHEFIGDSASAVIDESEKEGEEARNFLEYVRVTFPQVLRVVKTRQVTYSMLKHLSDYVQNLEKVGLLEEKEMLHLHDAVQTDLKKLLRNPPLVKMPKISDLLSAHPLLGVLPSMVPEPLESSTKEMVKLCGVTLYREGSKPNAICLISNGVVKWASKSLRNKHSLHPTFSHGSTLGLYEVLTGRPYICDMITDSVVHCFYVETGKILSVLRSDPAIEDFLWQESAIVIAKLLLPQIFEKMAMQELRALVVERSMMNIYLRGETLEISHHSIGFLLDGFIKTQDVQELITSPAVLLPSYGDLGFLSLETSGVKAASFCHQGSSYQIESRARVINFDMAAFEDDGGLQRRPASWVSHSIDLQNREHSGLMSWPEPLYKPRQHHQHSEGTDQQANSLSARAMQLSIFGSMTNNIRRRMPRRSQHEPLHSLSYPTVPSGRIHDRPLVSAQSEGAASQSLRAKEFTRPNFNPPQPSGSKKKSRVQDDSSDESDYDDELIVRIDSPSGLSFRQAS* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01941 1016 Pfam Sodium/hydrogen exchanger family 3 324 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Eupl04g01941 1016 MobiDBLite consensus disorder prediction 922 1016 - -
Eupl04g01941 1016 FunFam Sodium/hydrogen exchanger 7 601 738 - -
Eupl04g01941 1016 PANTHER SODIUM/HYDROGEN EXCHANGER 1 694 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Eupl04g01941 1016 MobiDBLite consensus disorder prediction 875 899 - -
Eupl04g01941 1016 MobiDBLite consensus disorder prediction 953 981 - -
Eupl04g01941 1016 Gene3D Jelly Rolls 600 732 IPR014710 -
Eupl04g01941 1016 SUPERFAMILY cAMP-binding domain-like 590 728 IPR018490 -
Eupl04g01941 1016 Gene3D - 32 84 - -
Eupl04g01941 1016 ProSiteProfiles cAMP/cGMP binding motif profile. 638 717 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01941 Eupl-Chr4 45403484 45643499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01941 3 1014 Antiporters AT2G01980 62.102 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01941 K14726 - nnu:104611075 1528.07