Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01934 ATGCACAGGTGCCGGTGGCTCTTTTTTCTAGTAGATTGGCAGTGGTCGACAATGGCGGAGTCGGTCGATGTCATTTTGGATTTCTTGCGAAGGAATCGATTTACTCGTGCAGAGGCTGCTCTGCGCGGTGAGCTTAGTAACCGTCCGGATTTGAATGGATCTCTTCAGAAACCCCTCTCGGAAGAAAAGGATTCCGGCAATCCGATGGAAGAAGAGAAGGGGGACAAACCAGCGGCAAAACAAACAGGTTCTTGGAGTAGCGGTGAAGTTTCTAATGAACTAATTGTTAAGGAGATTGAGTGTGGAACTGGTAGAAATGGTTCTGAAAGCAAATGGAGAACAGCTTCTGTTGGGGAACCAAATAAACCTAATGAATCCACTGTGACAAGCGAGAAGAGCTTTGCTTTCACTCAAGGGTCTGAGGACACTTCCTCGGATCTGTATTCGTGGAAATTCAATCCTTCCAATGGCCTCGTGGATTCATTTCAGGAGGATAGTGGCACTATTGCTAATAACTTTTCAGAGCTTCAGATATCCGAACAATCCAAGTTTTATCCGATAATTGGGGCAGTGGATTCTGGAGCAAGTTATGGAACCCAGTCGGGTTTATTGGGGGAGCAGAGAATTTCGTGGCCTGGAAGCACAAGTAAAGCCAATGTCGAACTGAAACGTGAGCAGAATCAGACAAGTGAGCTTAAGGAACTCAATCAGGCATTTAGGCCTTCCGGTGTGTACTCTAAAGATAAGTTAGCAGACAACCCGTGGTCCAAAAGAGAGGAAACCACACCATCTTTCTCAGATCCATGGAAAGAGTGCCCTGTCAAGACTGTTTTCCCATTCCCAAAGGGGGATGTGTTGGCCAGTTACGATGACATTCTTGGTTCTGGTGACAGCAAAAAAGAAGGGAAGAGGAAAGTGGAGAGCAGTGATGTCAGGGTAGCAACTAAGGAGCAGGTGGATGAGGTTGGAAGGGCTTTATTTTTGGGAAAGTCTCAAGGAAGTTCCGAGCAAAAGAATGATGGTAACTTGGATTTGCCACCGGTGGCCGAGAATCACAAGGAAGAGTTACCGAGGTTGCCACCCGTTAAACTCAAGTCGGAGGACAAGTCGGTGAACATTAATTGGGAGGAAAAGTATGATCGTCATGGATCTGGAGCAAAGCTCACCAGTGCAGAAAATGCTTTCTTGATAGGATCATTTCTGGATGTTCCCATCGGACAAGAGATCAACTCTTCAGGTTTAAAGAGGAATGTTGGAAGTAGTTGGCTATCTGTAAGCCAGGGCATTGCTGAGGATACTTCTGATTTGGTTTCTGGTTTTGCAACTGTTGGTGATGGATTGAGTGAATCAGTTGACTATCCAAATGAGTATTGGGATTCTGATGAATACGACGATGATGATGATGTTGGATACATGAGACAACCTATTGAAGATGAGACCTGGTTTCTGGCTCATGAAATTGATTACCCGAGTGACAACGAAAAGGGAACAGGCCACGGAAGCGTTCCAGACCAGCAGGAAAGAGGTCCAACTAAAGATGAGGATGATGACCAATCTTTTGCTGAGGAGGACTCTTACTTCTCTGGTGAGCAGTATTTTCAGGCGAAAAATATTGAGCAAGGTGCTGCTTCAGATGATCCTATAGGGCTTTCAATATCTGAAATGTATGGGAGGACCGATGAAAATGATTTAATAGCTCAGTATGATGGACAGTTGATGGATGAAGAAGAATTGAATTTGATGCGTGTAGAACCTGTTTGGCAGGGATTTGTTACCCAGACAAATGAACTCATCATGTTAGGGAATGGGAGAGTTTTGAATGAGTGTGAAAGGCCTCGGCCAGATGACCTTTGCATGGATGATGACCAGCATGGTTCGGTCAGATCAATTGGTGTGGGGATCAGCAGTGATGCTGCTGATATTGGTAGTGAAGTACGTGAAAGTTTGGTTGGAGGAAGCAGTGAAGGGGACTTGGAATACTTTCATGATCATGATGTTGGTATTAGTGGCTCCAGACATTCTCACCATGACACAGATAAGAGATATCTCGACAGATCAAACAGGGATAAAGGGTGGATGGCCAAACAGGATTCTGATAAATACATTATGGGGCATGAAAAGGGTGTTAGTACATTGGGGGCAAATTATACTGATGTCGGGTTTTCCTTCCCACCCCCTAGGAGAGCTGGGGATACAATGCCGGCAGACACTGATAAACCTTTATGGTCAAGCAAAGTGATCTGTGAGGAAACTAATGATTGTGAAAATGGTTTGGTGGGGACTGATGACATGCTAGCAACGTGGAGGCGTAAGAGCAGTGATTCTTCACCTGTCAAGAGCTCTAGGGATGATAATAATGCTAATGCTGTAAGATCAACTAATTCTACTGCATCAACACTCTCGAACTATGGTTATGCTGAAAGGGAGCATATCAAGAAAGGCGAAGATGACAAAGCTAGTGATGCAAGAGAAGAAGATCCAGGCACGACATTAGAGGATGAAGAAGCGGCAGCTGTGCAAGAGCAAGTAAGACAGATAAAGGCTCAGGAGGATGAATTTGAAACCTTCAATCTCAAGATTGTGCACAGGAAAAACAGAACTGGCTTCGAGGAGGATAAAAATTTCCATGTTGTTCTTAATTCAGTGATTGCTGGGCGTTATCATGTTACTGAGTATCTAGGATCAGCTGCATTCAGCAAAGCTATTCAAGCGCATGACTTGCACACAGGCATGGATGTTTGTGTGAAAATTATAAAGAACAACAAAGATTTTTTTGATCAGAGCCTTGATGAAATAAAGCTTCTCAAGTTTGTCAACAAGAACGATCCTGCTGACAAGTACCATATTCTGCGCTTGTATGATTACTTCTATTATCGAGAGCATCTGTTGATTGTTTGTGAACTACTCAAGGCGAACTTATATGAATTTCACAAATTCAATAGAGAATCTGGAGGGGAGGTCTACTTTACTATGCCCAGGCTGCAGTCGATTACAATTCAGTGTTTGGAGGCACTTCAATTTTTGCATGGCCTTGGCCTCATCCATTGTGATTTGAAGCCTGAGAATATTTTGGTAAAGAGCTACAGTAGGTGCGAGGTGAAGGTCATTGACCTTGGAAGTAGTTGCTTCCAAACAGATCATCTTTGCTCATATGTCCAATCTAGGTCCTATCGTGCACCAGAGGTTATTTTTGGACTTCCATATGATAAAAAGATAGATATCTGGTCACTTGGCTGCATCTTGGCAGAGCTTTGTACCGGAAATGTTCTCTTCCAAAATGATTCGCCTGCAACATTACTTGCACGGGTGATTGGAATCATAGGTTCAATTGACCAAGGCATGCTTGCCAAGGGACGAGATACATACAAATATTTCACCAAAAACCATATGCTTTATGAACGAAATCAGGACACCAACAGGCTGGAATATCTGATTCCTAAGAAGACATCCCTACGGCACCGGTTGCCAATGGGTGACCAAGGCTTCGTTGACTTTGTTTCTCACCTCCTTGAAATAAACCCGAAGAAGCGTCCAACTGCAACAGAAGCTCTGAAGCACCCGTGGCTTTCCTATCCTTATGAACCCATCTCATCTTGA 3597 0.4401 MHRCRWLFFLVDWQWSTMAESVDVILDFLRRNRFTRAEAALRGELSNRPDLNGSLQKPLSEEKDSGNPMEEEKGDKPAAKQTGSWSSGEVSNELIVKEIECGTGRNGSESKWRTASVGEPNKPNESTVTSEKSFAFTQGSEDTSSDLYSWKFNPSNGLVDSFQEDSGTIANNFSELQISEQSKFYPIIGAVDSGASYGTQSGLLGEQRISWPGSTSKANVELKREQNQTSELKELNQAFRPSGVYSKDKLADNPWSKREETTPSFSDPWKECPVKTVFPFPKGDVLASYDDILGSGDSKKEGKRKVESSDVRVATKEQVDEVGRALFLGKSQGSSEQKNDGNLDLPPVAENHKEELPRLPPVKLKSEDKSVNINWEEKYDRHGSGAKLTSAENAFLIGSFLDVPIGQEINSSGLKRNVGSSWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDETWFLAHEIDYPSDNEKGTGHGSVPDQQERGPTKDEDDDQSFAEEDSYFSGEQYFQAKNIEQGAASDDPIGLSISEMYGRTDENDLIAQYDGQLMDEEELNLMRVEPVWQGFVTQTNELIMLGNGRVLNECERPRPDDLCMDDDQHGSVRSIGVGISSDAADIGSEVRESLVGGSSEGDLEYFHDHDVGISGSRHSHHDTDKRYLDRSNRDKGWMAKQDSDKYIMGHEKGVSTLGANYTDVGFSFPPPRRAGDTMPADTDKPLWSSKVICEETNDCENGLVGTDDMLATWRRKSSDSSPVKSSRDDNNANAVRSTNSTASTLSNYGYAEREHIKKGEDDKASDAREEDPGTTLEDEEAAAVQEQVRQIKAQEDEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKFVNKNDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFQTDHLCSYVQSRSYRAPEVIFGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGSIDQGMLAKGRDTYKYFTKNHMLYERNQDTNRLEYLIPKKTSLRHRLPMGDQGFVDFVSHLLEINPKKRPTATEALKHPWLSYPYEPISS* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 107 131 - -
Eupl04g01934 1198 Pfam Protein kinase domain 887 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 243 268 - -
Eupl04g01934 1198 FunFam Serine/threonine-protein kinase ppk15 966 1190 - -
Eupl04g01934 1198 SMART serkin_6 887 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01934 1198 PANTHER DUAL SPECIFICITY PROTEIN KINASE 782 1189 - -
Eupl04g01934 1198 SUPERFAMILY Protein kinase-like (PK-like) 876 1191 IPR011009 -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 769 836 - -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 104 131 - -
Eupl04g01934 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1013 1025 IPR008271 GO:0004672|GO:0006468
Eupl04g01934 1198 FunFam Putative serine/threonine-protein kinase dyrk2 881 968 - -
Eupl04g01934 1198 Gene3D Transferase(Phosphotransferase) domain 1 941 1189 - -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 489 521 - -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 770 803 - -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 806 826 - -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 45 89 - -
Eupl04g01934 1198 MobiDBLite consensus disorder prediction 63 78 - -
Eupl04g01934 1198 Gene3D Phosphorylase Kinase; domain 1 881 968 - -
Eupl04g01934 1198 ProSiteProfiles Protein kinase domain profile. 887 1189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01934 1198 CDD PKc_DYRK_like 887 1189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01934 Eupl-Chr4 45170116 45199586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01934 886 1184 MAP Kinase Gene Family AT5G19010 30.915 5.13e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Eupl04g01934 Pkinase 2.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01934 - - ming:122078529 1859.73