Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01928 ATGCAGTTTGGGAGCCTGGAAGAAATGCTTCATGGGAAAACAAAGACAAGGGAAGGACGGATACTAACATGGGAAGAAAGAAAAAAGATCGCGCGAGGAGCAGCCAAAGGACTATGTTTCTTACACCACAATTGCATCCCACATATCATACATCGTGACATGAAATCAAGCAATGTGCTCTTGGACAATGAGATGGAAGCGAGAGTTTCGGATTTTGGGATGGCAAGGCTCATTAGCGCGCTTGATACACACCTGAGTGTGAGCACACTTGCAGGCACACCTGGGTACGTCCCACCTGAGTACTACCAGAGCTTCCGGTGCACGGCAAAAGGAGATGTTTATTCTTTTGGGGTCGTTCTTTTGGAGCTCTTGACAGGGAAACGGCCAACAGATAAGGAAGATTTTGGGGATACCAACTTGGTGGGATGGGTGAAGATGACGGTGAGAGAAGGGAAGGGAAAGGAAGTGATCGATCCCGAGCTGCTTTTGGCGAGTAAGGGGAGGAATGAAGATGAAGCTGAAGAGGTTAAGGAGATGATGAGGTATTTGGAGATAACGATGCAGTGTGTGGATGATTTTCCTTCAAAGAGGCCTAACATGTTGCAAGCTGTGGCCATGTTGAGGGAGCTGATGCCTGGGAAAAACAGTGGCTGA 654 0.4801 MQFGSLEEMLHGKTKTREGRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDNEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMTVREGKGKEVIDPELLLASKGRNEDEAEEVKEMMRYLEITMQCVDDFPSKRPNMLQAVAMLRELMPGKNSG* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01928 217 FunFam serine/threonine-protein kinase BRI1-like 2 1 217 - -
Eupl04g01928 217 SUPERFAMILY Protein kinase-like (PK-like) 1 207 IPR011009 -
Eupl04g01928 217 SMART serkin_6 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01928 217 Pfam Protein kinase domain 4 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01928 217 Gene3D Transferase(Phosphotransferase) domain 1 1 216 - -
Eupl04g01928 217 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 209 - -
Eupl04g01928 217 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01928 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01928 Eupl-Chr4 44847456 44848109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01928 1 210 Receptor kinase-like Gene Family AT1G55610 65.877 3.00e-92 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Eupl04g01928 Pkinase 7.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01928 - - rvl:131301386 402.905