Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01919 ATGGATGATGATAGTGGATTGGGTATCCGTAATTGGGGTTATTATGAGCCATCCCTTAAAGGGAACCTTGGTCTACAGCTCATGTCGTCTGTGGCAGAGCGAGACACTAAAGCTTTCCTCTCTGGACGCGATTCCACAGTTATGGTTAGTGCCAATGGAGCTTTTCACCATAGGGATTGTGGGGTCCCGGAATCGTCTGTCCCCATGGATTTTGTGAGGGATGGTTGGATCAGCCAGAGAGACAGGCTTCTTCATGTGCTGCCAGGGAACCCTAATTTTGCAGTTCTATCTGAAACCTCCGGAACTCAGGCCTTGCAGATGCTACAGCCACCTGATTTGTCAAAGGATGATAGGGTGGTTCGGATGGAGGAGGCAACCAGTAAAAAGGATGGCCCTTTGAAGAAGAGACAAGGTGGTCGTGCCCAAAAATCACCAAAAACAAAGAAGACTAAGAGGGCTGGGCCAAAGGACGAATCTAATTCTTCTGTTCAACGAGCAAAGCCTGGAAAAAAGAACATGGGAGTCGTCATTAATGGTATCGATATTGATCTTTCAGGTATTCCTATACCGATTTGCTCGTGCACCGGAACTCCGCAGCAGTGTTACCGATGGGGCTGTGGTGGGTGGCAGTCGGCATGCTGTACCACAAGTATTTCGACATACCCCTTGCCAATGAGCACCAAAAGGCGTGGGGCAAGGATAGCTGGACGGAAAATGAGTCAGGGTGCATTTAAGAAGGTCTTGGAGAAACTTGCTGCAGAAGGTTATAACCTTTCTAATCCAATTGATTTGAGGACTCACTGGGCAAAACATGGTACCAACAAGTTTGTCACAATCAGGTTCATTTTGTTCATCCGAAACCAATGA 867 0.4752 MDDDSGLGIRNWGYYEPSLKGNLGLQLMSSVAERDTKAFLSGRDSTVMVSANGAFHHRDCGVPESSVPMDFVRDGWISQRDRLLHVLPGNPNFAVLSETSGTQALQMLQPPDLSKDDRVVRMEEATSKKDGPLKKRQGGRAQKSPKTKKTKRAGPKDESNSSVQRAKPGKKNMGVVINGIDIDLSGIPIPICSCTGTPQQCYRWGCGGWQSACCTTSISTYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNLSNPIDLRTHWAKHGTNKFVTIRFILFIRNQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01919 288 PANTHER - 1 280 IPR010409 -
Eupl04g01919 288 Pfam GAGA binding protein-like family 1 280 IPR010409 -
Eupl04g01919 288 SMART GAGA_bind_2 1 280 IPR010409 -
Eupl04g01919 288 MobiDBLite consensus disorder prediction 124 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01919 Eupl-Chr4 44232798 44244544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01919 1 280 BBR or BPC Transcription factor family AT2G01930 52.805 2.91e-102 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Eupl04g01919 GAGA_bind 1.6e-115 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01919 - - ming:122069968 496.893