Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl04g01917 | ATGTGGGGAGATAGAGAAAGTCTGCCAATGGAGGGAGACGGCCCAAACGAGGCCTATAGAGAGTGTTTGAGAAACCACGCGGCCAGCCTCGGCAGCTACGCAACAGACGGCTGTGGTGAGTTTACGCTCGACGATAATGCACCTGATGGGCTAAAGTGCGCTGCGTGTGGTTGTCACCGGAATTTTCACCGGAAAGTAACTATTCAAGGCGGTGCTGGTGGTGGTGGGAGAAGGGGAAGCAGCAACTGCCCTGGAAGAGACCCCACGGAAGTAATGGAACTGATAGAGTATAGGACGGTGCAGCTGAATTCGGTGGAGTCGCATGAATCGGAACGGAGCGGGAAGAAGCGAGGGAGGACCAAGTTCACGTCGGAGCAGAAGGAGGAGATGCTCGCGTTTGCTGAGAAGCTTGGGTGGAGGATACGGAGGAAAGATCAGGAAGATGAGATCGAACGGTTCTGCAAAGGTGTTGGGGTTAGTAGGCAGGTATTCAAGGTGTGGATGCACAACCACAAGAACTCTTCCTCCTCATCTGCTTCTAATGGCAATGCCTCTTCTCTTACTCAATAG | 570 | 0.5316 | MWGDRESLPMEGDGPNEAYRECLRNHAASLGSYATDGCGEFTLDDNAPDGLKCAACGCHRNFHRKVTIQGGAGGGGRRGSSNCPGRDPTEVMELIEYRTVQLNSVESHESERSGKKRGRTKFTSEQKEEMLAFAEKLGWRIRRKDQEDEIERFCKGVGVSRQVFKVWMHNHKNSSSSSASNGNASSLTQ* | 190 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl04g01917 | 189 | Gene3D | - | 101 | 179 | - | - | |
Eupl04g01917 | 189 | NCBIfam | ZF-HD homeobox protein Cys/His-rich dimerization domain | 19 | 65 | IPR006456 | - | |
Eupl04g01917 | 189 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 19 | 66 | IPR006456 | - | |
Eupl04g01917 | 189 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 18 | 174 | - | - | |
Eupl04g01917 | 189 | MobiDBLite | consensus disorder prediction | 108 | 124 | - | - | |
Eupl04g01917 | 189 | Pfam | ZF-HD protein dimerisation region | 18 | 67 | IPR006456 | - | |
Eupl04g01917 | 189 | SUPERFAMILY | Homeodomain-like | 105 | 173 | IPR009057 | - | |
Eupl04g01917 | 189 | MobiDBLite | consensus disorder prediction | 104 | 124 | - | - | |
Eupl04g01917 | 189 | NCBIfam | homeobox domain, ZF-HD class | 115 | 173 | IPR006455 | - | |
Eupl04g01917 | 189 | FunFam | Zinc-finger homeodomain protein 2 | 103 | 177 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl04g01917 | Eupl-Chr4 | 44143599 | 44144513 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl04g01917 | 19 | 174 | ZF-HD Transcription Factor Family | AT4G24660 | 47.024 | 1.38e-42 | 140 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | zf-HD | Eupl04g01917 | ZF-HD_dimer | 2.8e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl04g01917 | - | - | nnu:104587730 | 248.054 |