Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01912 ATGCTCTATAGCACCACACATATGGAGCGTCCGTCTGGTGTAAGAAAAGGTGCATGGACCAAAGAAGAAGATCTTCTTCTCAGGAAATGCGTCGGGAAATATGGAGAAGGAAAGTGGCATCAGGTTCCTCTTAGAGCAGGGCTAAATCGATGTCGTAAAAGCTGTAGGTTGAGATGGTTGAACTATCTTCGACCAGATATCAAGCGAGGAAGGTTCACAGCTGACGAAGTTGATCTCATCGGAAGGATGCATAAGCTCTTAGGCAACAAATGGTCGTTAATTGCTGGTAGACTTCCGGGAAGAACAGCAAACGATGTCAAGAACTACTGGAACACTCACTTGAACAACAAAAAGCTTATTTCTCAATCCGGTGAGGTGAAAGACGATGAACTTAGAACTCGAACTATGGAGACCAAAGTTATAAGACCTCTGCCTCGAACCTTCTCGAAAAATTCCAAGTGGTTGAGAGGGATTGGTACCTCCATAGACACAACACAATCTGGAAGAGAAATGCACAAACCAGCACACGAATTTATTCGAGACGAACCAGCGCTATGGTTGGAAAACATTCTATTTGAGGAGGAAGATCATGAGAAGGGGATCTCCAGCTCCATGAGTGGGTCGTCTATGGAGGAGCTTATTACAAGCCTTTGGGTTGACGACATGGAAGCAAAGACAAAGGGAGGAGACACTTTGGTCGTAGAAGTAGAACATGGGAATAGTGATTGGGATGCTTTGTGTTTGGACGGGAATCTATGGGGTCAGTTAGGGCTGGGATGTTAG 783 0.4521 MLYSTTHMERPSGVRKGAWTKEEDLLLRKCVGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLRPDIKRGRFTADEVDLIGRMHKLLGNKWSLIAGRLPGRTANDVKNYWNTHLNNKKLISQSGEVKDDELRTRTMETKVIRPLPRTFSKNSKWLRGIGTSIDTTQSGREMHKPAHEFIRDEPALWLENILFEEEDHEKGISSSMSGSSMEELITSLWVDDMEAKTKGGDTLVVEVEHGNSDWDALCLDGNLWGQLGLGC* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01912 260 SMART sant 68 116 IPR001005 -
Eupl04g01912 260 SMART sant 15 65 IPR001005 -
Eupl04g01912 260 FunFam Myb transcription factor 16 68 - -
Eupl04g01912 260 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Eupl04g01912 260 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Eupl04g01912 260 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 12 159 - -
Eupl04g01912 260 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Eupl04g01912 260 CDD SANT 71 114 IPR001005 -
Eupl04g01912 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Eupl04g01912 260 CDD SANT 18 63 IPR001005 -
Eupl04g01912 260 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Eupl04g01912 260 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Eupl04g01912 260 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 67 IPR017930 -
Eupl04g01912 260 Gene3D - 70 141 - -
Eupl04g01912 260 Gene3D - 16 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01912 Eupl-Chr4 43858694 43861493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01912 9 152 MYB Transcription Factor Family AT1G66370 63.399 1.29e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl04g01912 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01912 - K09422 vvi:100243253 259.225