Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01907 ATGGTTGGATTTGCTATTCATTTGAAGAAAAAGAAGCCGGAATGGTTGGAAATTCTACTGCAGAGCAGGTTTTTTGGTCCGTGCTTCGATCATCAAGAACTCAAAAAGAGCGAGAGGAATGTGTTCTGTATGGACTGCAACGAATGCATCTGCCAGCACTGTCTATCTTCATCATCGCATTACCTCCACAAACTGCTCCAGATTCGCAGATACGTCTATAACGACGTCATCCGCCTTCAAGACATGCAAAAGCACCTTGACTGTGCTAAAGTTCAGACGTATACGATCAATAATGCAAAGGTCGTGTTTCTAAATCCTCGCCCGCAATCAAAGTCGTCCAAATCCAACAGCGGTGCATCCTGCGAAATCTGCGAGAGAAGCTTAGCGGAACCAAATCGATACTGCTCTCTGGGTTGCAAGGTTTCAGCAACTGCGAATCAATCGAGTGATCAAAGTAGTCCTCCAATTCTATCTTTCCAAATTCCGGAATTCAGCGATCTCTCTTCTTCTAAGAAAAATGAGACCAAAAATCGAATCATGAAGAAGGAGAATCATCAAACTCGGCCTCGGCAGCAGCAGCGGCCGCATCAGCAGCAACAGAGCCTGAGGAATCGATCGAGGACGAGAACCAGAACAAGAACAAGATTACTTCGGCATTGTTGA 663 0.454 MVGFAIHLKKKKPEWLEILLQSRFFGPCFDHQELKKSERNVFCMDCNECICQHCLSSSSHYLHKLLQIRRYVYNDVIRLQDMQKHLDCAKVQTYTINNAKVVFLNPRPQSKSSKSNSGASCEICERSLAEPNRYCSLGCKVSATANQSSDQSSPPILSFQIPEFSDLSSSKKNETKNRIMKKENHQTRPRQQQRPHQQQQSLRNRSRTRTRTRTRLLRHC* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01907 220 ProSiteProfiles Zinc finger B-box type profile. 28 68 IPR000315 GO:0008270
Eupl04g01907 220 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 10 201 - -
Eupl04g01907 220 MobiDBLite consensus disorder prediction 206 220 - -
Eupl04g01907 220 Gene3D Classic Zinc Finger 25 90 - -
Eupl04g01907 220 MobiDBLite consensus disorder prediction 162 220 - -
Eupl04g01907 220 Pfam B-box zinc finger 27 67 IPR000315 GO:0008270
Eupl04g01907 220 MobiDBLite consensus disorder prediction 191 205 - -
Eupl04g01907 220 CDD Bbox2 28 68 - -
Eupl04g01907 220 MobiDBLite consensus disorder prediction 169 190 - -
Eupl04g01907 220 SUPERFAMILY B-box zinc-binding domain 27 85 - -
Eupl04g01907 220 Pfam PLATZ transcription factor 69 141 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01907 Eupl-Chr4 43678199 43680017 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Eupl04g01907 PLATZ 1.2e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01907 - - nnu:104607293 247.669