Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01889 ATGGCAACATTGCACTACCTTCTCTCCCTAGCTCTAGTTGCAGTGTTGATCAGCCTGTCCTCCTTGGCAGCTGCTGCTGATAGAGGGACTGCAACTTTCTATACTCCTCCATACGTTCATGATGGTGTGATGATCGCTGCGGCGAGTGATTCCATCTGGAACGACCGAGCGGCTTGCGGAAGGGTGTACAAGGTCAAGTGCCTTAGTGCCACCAACATGGGTGATCCACACCCGTGCAGAGGGGATGGAACAGTGGTTGTGAAGATCGTGGACTATTGCCCGGCTGGGTGTCAGGGCACCATTGACTTATCCCAAGAAGCCTTCGCCTCCATTGCGAATCCCGACGCTGGAAAGATAAACATCGCTTACCACCGGTACGTAACATAG 387 0.5323 MATLHYLLSLALVAVLISLSSLAAAADRGTATFYTPPYVHDGVMIAAASDSIWNDRAACGRVYKVKCLSATNMGDPHPCRGDGTVVVKIVDYCPAGCQGTIDLSQEAFASIANPDAGKINIAYHRYVT* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01889 128 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 23 128 IPR007112 -
Eupl04g01889 128 SMART dpbb_1 45 123 IPR007112 -
Eupl04g01889 128 CDD DPBB_EG45-like 27 124 - -
Eupl04g01889 128 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 10 124 IPR044206 GO:0009627|GO:0048046
Eupl04g01889 128 Gene3D - 23 126 IPR036908 -
Eupl04g01889 128 FunFam Barwin-related endoglucanase 26 125 - -
Eupl04g01889 128 Pfam Lytic transglycolase 46 123 IPR009009 -
Eupl04g01889 128 SUPERFAMILY Barwin-like endoglucanases 25 125 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01889 Eupl-Chr4 43053950 43055633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01889 21 125 Expansin Gene Family AT2G45110 31.034 5.21e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01889 - - dzi:111281490 165.236