Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01886 ATGGGGAATGGAGAGACTGATGCTCAAACGAAGACACCAAAGTCATCTTCGACACAGGAGCAACCTCCTCCTAGCAGCCCTGCCACAGTTTATCCTGATTGGGCTTCATTTCAGGCATATTATAACTCTGCTGGAACACCTCCAATTCCTCCACCTGGCTTTTTTCATTCTTCTGTGGCATCCAGTCCTCAAGCTCATCCATACATGTGGGGACAGCACATGCTCCCTCCATATGGAACACCACCTCCTCCGTATGTTACCATGTATCCACATGGGGGACTCTATGCTCATCCATCCATGCCGGGTTCTCATCCATATAGCCCCTATGCGATGCTTTCTCCCAATGGGACAGCTGAAGCCTCTGTTGCAGTGGCTGGTGGTGGAGAATTAGAGGGTAAATCAGGTGAAGGTAAGAGCAAGAATCCCCTAAAGAGATCCAAAGGAAGCTTAGGAAGTTTAAATATGCTTCCAGCCAAGGGCAATGAGATGGGAAAAGCATCTGGTGCATCCGCCAATGGTGGCTTCTCACAGAGTGGCGACAGTGGGAGCGAAGGCTCAAGTGAAGGAAGTGATGCCAATTCTCAAAATGGTTCACAGCAGAAGCCAAGCAGCCAAAAAGATTCTGAAGATGCTGAGGCCCAGGATGAGGGCACTGCTTGCAGTGTATCAAGTGGGGTTACACATACAACCCCAAGCCAGGCCGTGATGAACCAAGGTATGGTTATGGCCATCCCACCAACCACTGCTTCTGGTCCAACAACAAACCTGAACATTGGCATGGACTACTGGGGAGGGCCTGCACCCGTGCCAGTTGCTACATCCCGAGCCAAGCTCCCTGCTGTACCGGCTACAGCTGCCATAGTCCATTCCAGTCTAATGGGATCCCGTGATGGCGTTTCCTCAGAACATTGGATACAGGACGAAAGAGAGATTAAGAGGCAAAGAAGAAAACAATCTAATAGAGAATCAGCACGGCGGTCAAGGCTGAGGAAGCAGGCTGAGTATGACGAACTTGCTCAGCATGTGGATGCCCTAAAAGAGGAGAACAGTTCACTCAGAGAAGAATTGGAGCGTATACGGGAGGAATGCGAAAAATTGGCATCAGAAAATGCTTCTCTCACTGAGAAACTTCAGAAACATCTGGGAGAGGGCTCAAGGGTGGATGGTGTTAATGGTGAGCCAGATTCTGATCCCTAA 1197 0.4979 MGNGETDAQTKTPKSSSTQEQPPPSSPATVYPDWASFQAYYNSAGTPPIPPPGFFHSSVASSPQAHPYMWGQHMLPPYGTPPPPYVTMYPHGGLYAHPSMPGSHPYSPYAMLSPNGTAEASVAVAGGGELEGKSGEGKSKNPLKRSKGSLGSLNMLPAKGNEMGKASGASANGGFSQSGDSGSEGSSEGSDANSQNGSQQKPSSQKDSEDAEAQDEGTACSVSSGVTHTTPSQAVMNQGMVMAIPPTTASGPTTNLNIGMDYWGGPAPVPVATSRAKLPAVPATAAIVHSSLMGSRDGVSSEHWIQDEREIKRQRRKQSNRESARRSRLRKQAEYDELAQHVDALKEENSSLREELERIREECEKLASENASLTEKLQKHLGEGSRVDGVNGEPDSDP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01886 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Eupl04g01886 398 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 383 IPR044827 GO:0003700|GO:0006355|GO:0043565
Eupl04g01886 398 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Eupl04g01886 398 CDD bZIP_plant_GBF1 313 350 IPR045314 GO:0003700|GO:0006355
Eupl04g01886 398 FunFam BZIP transcription factor 310 361 - -
Eupl04g01886 398 Pfam Disordered region downstream of MFMR 140 267 - -
Eupl04g01886 398 MobiDBLite consensus disorder prediction 128 230 - -
Eupl04g01886 398 Coils Coil 328 383 - -
Eupl04g01886 398 Pfam G-box binding protein MFMR 1 101 IPR012900 -
Eupl04g01886 398 Gene3D - 311 366 - -
Eupl04g01886 398 MobiDBLite consensus disorder prediction 1 24 - -
Eupl04g01886 398 MobiDBLite consensus disorder prediction 170 204 - -
Eupl04g01886 398 MobiDBLite consensus disorder prediction 1 31 - -
Eupl04g01886 398 MobiDBLite consensus disorder prediction 374 398 - -
Eupl04g01886 398 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Eupl04g01886 398 MobiDBLite consensus disorder prediction 301 317 - -
Eupl04g01886 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Eupl04g01886 398 SUPERFAMILY Leucine zipper domain 311 367 IPR046347 GO:0003700|GO:0006355
Eupl04g01886 398 MobiDBLite consensus disorder prediction 292 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01886 Eupl-Chr4 42796570 42826137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01886 32 397 bZIP Transcription Factor Family AT2G35530 54.960 9.68e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl04g01886 MFMR_assoc 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01886 K09060 - nnu:104607278 516.153