Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01879 ATGGCAGCCAAAGACGGTTCGAGCTTCCGACTGTCAGCGACACCCGTGACCATTTTGGCGCATTTGTTAGGCATAGCAGCTACGACCCTTGTGCTCGTTTGGACCTTACACTTCCGAGAGGGCCTCGCTCTAAAATCCGATATTAAACAAAAAATTTTCAATCTGCACCCAGTTCTTATGATAATTGGGTTTATTTTTGTTGGAGGAGAAGCAATCATGGCGTACAAGACGGTTCCTTCGACAAGAAAGGTGCAAAAGTTGGTTCACCTGATGTTGCATTTTATCGCGCTTCTCGCTGGTATTTTCGGAATCTATGTCGTTTTCAAGTTTCACAATGAGGCCGGAATTCCCGATTTATACACCTTGCATTCCTGGCTTGGCATAAGCACCATCTCCTTATTTGGGTTGCAGTGGTTGTTAGCATTCTTCTCCTTCTGGTTCCCTGGGGCAGCGATGCCGGCAAGGGCGAGGTTCGTACCATGGCATGCTTTCTTCGGCATGGTCATCTTCCTCATGGCAATTTGCACTGCTGAAACAGGTTTGGTACAGAAATTCATATATTTAGATCTATTCCGCAGCCAAGAAGCTCTCATCGTAAATTTCACCGGACTTATCATCCTCCTCTTCGCAATCATGGTCAGCCTTAGTGTTATTCTTCCGCGATCTTATTATTAA 675 0.4563 MAAKDGSSFRLSATPVTILAHLLGIAATTLVLVWTLHFREGLALKSDIKQKIFNLHPVLMIIGFIFVGGEAIMAYKTVPSTRKVQKLVHLMLHFIALLAGIFGIYVVFKFHNEAGIPDLYTLHSWLGISTISLFGLQWLLAFFSFWFPGAAMPARARFVPWHAFFGMVIFLMAICTAETGLVQKFIYLDLFRSQEALIVNFTGLIILLFAIMVSLSVILPRSYY* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01879 224 SMART 561_7 55 181 IPR006593 -
Eupl04g01879 224 Gene3D - 8 223 - -
Eupl04g01879 224 FunFam Cytochrome b reductase 1 10 223 - -
Eupl04g01879 224 Pfam Eukaryotic cytochrome b561 55 187 IPR006593 -
Eupl04g01879 224 CDD Cyt_b561_ACYB-1_like 46 188 - -
Eupl04g01879 224 PANTHER CYTOCHROME B561-RELATED 11 219 IPR043205 GO:0016491
Eupl04g01879 224 ProSiteProfiles Cytochrome b561 domain profile. 19 218 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01879 Eupl-Chr4 42624425 42625526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01879 10 216 Chloroplast and Mitochondria Gene Families AT4G25570 47.642 4.13e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01879 K08360 - vvi:100262850 330.487