Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01865 ATGCCCCTTGAAGGGTTGTTTGTTGAATCGTCTTCGTTGTCGGCTCCCGATCTCTCCTTGCACATTAGCCTCCCTAACAGTGCTCCTCCTTCGATTTGTAATACCAACAACGAACAAGATACAGGAATTGATCTTTGGCTCCGACGTGAAAGTCTCAAGTGCAATACCGATAGCTCCGTTAGAACCGACTACCGGGCTTATACTGACCTCTCACTAGCAAACCCAACGAATACCTTAGAGGCTGAGAGCCGGTGGAGAAGAAATTTCCTGAGAGGAGGTGAAGAAGATGAAGCGCGACAACAACCACCACACGATCAGTATCATCAACATTATCAACTTCACCATCCTAACAACCACCGATTAAATCACCTAAATCATGGGGTTTCACTCCTTGATGTCTCAGATGGGCTAAGTCCGATAAAAGGGATTCCAATCTATCACAACCGTTCCTTCCCCTTCTTGCCTTCCGAACATTCGAGAGACAAGGATCCTAAGATGTGCTTCTATCCCTCATGGTCATCTTCCTTATCACAATCCTCCTCTTGTTCTTCTTCCTGTTCTTTTTCTGCTTCTCCTTCTTATTCGTCGTTTATGGGAGGAAGATTGGACCCCATGGCGATCTTACACTCGGGTCCAAACTCTTCATCTCCACCGGCTTACCGGATGGCAGCTGCAACAAGGTTTAATGGGATGCCCTCGGACTCGCTCAAATCTCATCAACTTCATCATCATCACCACCACAATCAGTTCGGAATCGGGACTTCCGAGCCTTCCCAAGGAATGATTAGATCAAGATTCATGCCAAAGCTCCCGACAAAACGGAGTATGAGAGCCCCGCGGATGCGCTGGACAAGCAGTCTTCACGCTCGCTTCGTTCATGCCGTGGAGCTCCTCGGCGGCCATGAGAGGGCGACTCCAAAGTCAGTTCTTGAGCTCATGGATGTAAAAGATCTCACGCTAGCTCATGTCAAGAGCCATTTACAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCCTCAGGCCAATCTGATGGATCTGCTGGAGAAGAAGATTTCACATCTGCTGCTCCACCCAATGATTTCAATTTACAACGATTTATGAATCAAAGAGTATCATCAGATGGGTCTTTGCAACAAGACATGGATTACCCGTCTACTACACGGTGGAGTAACTCATCAAGTAGAGGAGCTTGGATACAAACCAACTCAAGCGACATAGATGGGCTTAGACCGGCAGCCTTTTCATCTCAACGAACATCTGGGCACCAAATTGAGGTAGCGATCGACTTACATCTGATGTTTCACAAACGCGTTTTTCTATTTTATACTCATCTACATACAGGCAAGACATACATTTGCTACTCTTTCATGCATACACATGTACCATGTATATTCCATTGCAAGTACATGCAATCTCTATTTGAAAATGAACAATGTCTGAATCATTACAGGAAAGTGATTTCAATCGATCCAAAGACTTCCTAG 1494 0.4578 MPLEGLFVESSSLSAPDLSLHISLPNSAPPSICNTNNEQDTGIDLWLRRESLKCNTDSSVRTDYRAYTDLSLANPTNTLEAESRWRRNFLRGGEEDEARQQPPHDQYHQHYQLHHPNNHRLNHLNHGVSLLDVSDGLSPIKGIPIYHNRSFPFLPSEHSRDKDPKMCFYPSWSSSLSQSSSCSSSCSFSASPSYSSFMGGRLDPMAILHSGPNSSSPPAYRMAAATRFNGMPSDSLKSHQLHHHHHHNQFGIGTSEPSQGMIRSRFMPKLPTKRSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSAGEEDFTSAAPPNDFNLQRFMNQRVSSDGSLQQDMDYPSTTRWSNSSSRGAWIQTNSSDIDGLRPAAFSSQRTSGHQIEVAIDLHLMFHKRVFLFYTHLHTGKTYICYSFMHTHVPCIFHCKYMQSLFENEQCLNHYRKVISIDPKTS* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01865 497 MobiDBLite consensus disorder prediction 235 258 - -
Eupl04g01865 497 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 416 IPR044847 GO:0000976|GO:0006355|GO:0010158
Eupl04g01865 497 Gene3D - 278 335 - -
Eupl04g01865 497 MobiDBLite consensus disorder prediction 377 398 - -
Eupl04g01865 497 MobiDBLite consensus disorder prediction 335 363 - -
Eupl04g01865 497 MobiDBLite consensus disorder prediction 335 352 - -
Eupl04g01865 497 FunFam Myb family transcription factor 277 335 - -
Eupl04g01865 497 SUPERFAMILY Homeodomain-like 276 332 IPR009057 -
Eupl04g01865 497 NCBIfam myb-like DNA-binding domain, SHAQKYF class 279 332 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01865 Eupl-Chr4 41922510 41931844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01865 107 412 G2-like Transcription Factor Family AT5G16560 49.221 2.47e-68 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl04g01865 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01865 - - nnu:104607257 540.421