Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01849 TTTGGAATAAGCATAGGTTTAATAATTTTACTTGCCATCAGTTTATGGTTGTATTGTCGACTTGAGAAAAGAAAGCAAATGAACCTCAAACAAAAGTTTTTCAAGCGAAATGGTGGTTTATTGTTAAGACAACAAATCTCTACAGATGATGGCAGTGTTGAGAAAGCCAAAATCTTTGTCACAGAAGAATTGGAAAGGGCAACGGACAATTTCAACCAAAGTCGAGTTCTAGGCAGAGGAGGTTTTGGTACAGTTTATAAAGGCATGTTATCAGATGGTAAGATAGTAGCCATTAAAAAGTCCAAATTAGTGGATGAATGCCAAGTTAGTCAATTCATTAATGAAGTTGCCATTCTTTCACAAATCAACCACAGACACATAGTGAAATTGTTAGGCTGTTGTTTAGAGACCCAAGTTCCCTTATTAATTTATGAATTTGTTTCTAATGGGACCCTCTTCCACCATCTCCATGATGAGAGCCATATGTCGTCGCTTTCTTGGGAAAATCGATTAAGGATTGCATCTGAAATTGCAGGAGCACTTGCCTATTTGCACTCAGCCGCTTCTGTACCTATCTTTCACAGAGACATAAAGTCTAGCAACATACTCTTGGATGAAAATTATAGGACTAAAGTGTCTGACTTTGGACTTTCAAGGTCAATTCCCATTGATAAAACCCATTTAACAACACTAGTGCAGGGGACTTTTGGTTACTTGGATCCTGAGTACTTCCATTCAAGCCAATTTACAGAAAAGAGTGACGTTTACAGCTTTGGAGTAGTTCTTGTGGAGCTCTTAACTGGGGAAAGGGCAGTTTGTCTCAGGAGATCTGAAGAAGGAAAAAATCTAGCTATGTATTTCATATCGTCAATGAAAGAAAACCGTTTATTTGAAATTCTAGAGACCCGAGTTGTGAATGAAGGGGACAAAGAAGAGCTTGTGGCTATTGCTAAACTTGCAAAGAGATGTGTAAAATTGAATGGGAAAAAAAGGCCGACTATGAAAGAAGTAGCGGCAGAACTTGATGGACTGAGAGGATTTCGGGAGCATCCATGGGTTCAGCAAGAGTGCCAAGAGGATGAATGCTTAGTAGGAGAAGCAACATCTTGTTACACAGGTGGTACAATTGGAGAAACATCATCTTATTACACAGGTGGTACAATTGGAGAAACATCATCTTGTTACACAGATGATACAATTGAGATAGAGAGTTTGGGACTAATCATGTCGACAACCAACTAA 1242 0.3873 FGISIGLIILLAISLWLYCRLEKRKQMNLKQKFFKRNGGLLLRQQISTDDGSVEKAKIFVTEELERATDNFNQSRVLGRGGFGTVYKGMLSDGKIVAIKKSKLVDECQVSQFINEVAILSQINHRHIVKLLGCCLETQVPLLIYEFVSNGTLFHHLHDESHMSSLSWENRLRIASEIAGALAYLHSAASVPIFHRDIKSSNILLDENYRTKVSDFGLSRSIPIDKTHLTTLVQGTFGYLDPEYFHSSQFTEKSDVYSFGVVLVELLTGERAVCLRRSEEGKNLAMYFISSMKENRLFEILETRVVNEGDKEELVAIAKLAKRCVKLNGKKRPTMKEVAAELDGLRGFREHPWVQQECQEDECLVGEATSCYTGGTIGETSSYYTGGTIGETSSCYTDDTIEIESLGLIMSTTN* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01849 413 SMART serkin_6 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01849 413 SUPERFAMILY Protein kinase-like (PK-like) 54 341 IPR011009 -
Eupl04g01849 413 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01849 413 FunFam Wall-associated receptor kinase 2 41 146 - -
Eupl04g01849 413 FunFam Wall-associated receptor kinase 2 147 364 - -
Eupl04g01849 413 Gene3D Transferase(Phosphotransferase) domain 1 147 364 - -
Eupl04g01849 413 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Eupl04g01849 413 CDD STKc_IRAK 77 344 - -
Eupl04g01849 413 Gene3D Phosphorylase Kinase; domain 1 43 146 - -
Eupl04g01849 413 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 354 IPR045274 GO:0007166
Eupl04g01849 413 Pfam Protein kinase domain 71 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01849 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01849 Eupl-Chr4 41315156 41316560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01849 2 361 Receptor kinase-like Gene Family AT1G16120 60.773 1.31e-154 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl04g01849 Pkinase 8.8e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01849 - - msin:131240251 531.946