Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01839 ATGCTAACCCTCTTTTTCCCTTCCACTCACGTCTCTCTCTCACTTTCGAATCCTCACCACCGTCCACTGTCTTTTCCAGGCAAACCTGCAACTCCGGCAAGTCTGCAACACCACAACACCGAGCTCCCCTCTTCTTTTCTACCTTGCCGCCAGCACCATCCACTTCGGGCTCCCCCTGAGCACCGCCAATCTGCAACTCATTCATTCCGACCAGCAACTTCACCACTCCTGTCGGGCAACAACTCAAGTGGGGCTCTTTCTCATTGCATGTCTAAGACAACCGCCTGCACCTTCGACCTGCAACACCCGCAAGTGCGTTCCGGCCTGGTAGCGCCTCCAAACACCACCAATGTGAAGAACCAGTGGCTCCCTCCACCACGGGCCACCATACCAGGTGAGAAAGCAGAGAAGATCTGCCTCTTCTCCGAGCATCTGATCTTTCATGCCAAACACTTGCAAATCTCCAGCCTGATCAGCAACAAATCTTCATCCTTCACCACAACCAGCAACCATCTTCATCTTCAAATGGCCTGCCACCTCACGGATCCGTCCACCTTCATCTTCCATGCACCTCCGGGCAGCCACTACCATTCAACTTGGTCGGATCACACCTTCATCATTGGCCAATCATTGGTCGATGCAACTCCGATAAACTCTCCAAGGAAGGTACTTTGGATTATATCCATTCAGATGTTTGTTGCACAACGGTACATGTTTGAGCGCCTTAGGGGCGCATTGGAGATGGTGATCGGATTGGAGGATCTCCTAGCAGATGCTGGTGTTTGCAAAGCGGTTGACGAGTGGCTCGTGGTGGTGGCTCGCAGAGCAATTGAGCAGATACTCTTGGTGGCAGCTCACGGAGTAGTTGAGCAGTGGCTCGTGGTGGTGGCTCGTAGAGCGGTTGATCAATGGCTCGTGGTGGTGGCTTGCATTCACACCAAGGTGGAGATTGTTGTATTTTTGCCAGCTAAGATGAACAGAAACGTGAGTCCAATTCGTCAACAGAGCAGTTTAAGAAGGAAGCGAAAGGTTCAAGTTCAGCCAGTTAACTACGTTAAGAAGCTCCGATCGAAGATTCCTCGTCGAAAACGCTTCCACATCTCTCCAATTCTCAGTGGATCTGTGAATTCCCTTAATGAGACGACGGAGTTTTCAGCTTTTCCAGCAGCTTCCAGCTCTTCTTCATGCTTTCCTGAAGAAATTTCGTGTACTTCGAACTGGATATCAGTCAGATCTGAGAATTTGAAGAAGCCGAGATCGTTTCGTCGGAAGAGAGATACTGAGGAGATTTCGGGATTTGGAGCTCCAATTCATGCAACTGTGCAAAGTTCCCGTCAACTGGAGAAGATTTCTGACGGAGAGTGCCAGAGGAAAACCCGATCTTATTACAGACAGAAAGAAAGTGAAAGAGAGGTGGTGAAGAAAAGTAAAGGAGATCTTGGAGTCGAGTTATCAGAATCTTCATGTGTAGAATCGTTTTCTGGAGCAGAGGCTGGATTTTTCGGCAAATCAAACGAGTTTTCTGAGAGAAATTTAAAGTGGAAAGCCAGAGCACGTAAAATAGGTCAAAAGGAAGAAGAAAGTGAAGGAAATGCAGCTTCTGCAGCAGTGTCGCTTTCAGAAGTTTCTTGCATCCAATCGTCTTTTCAAGAGGACAGTAGAAATCTCTGCAAATCCTATGAATTTTCCAAGAAAACATGGCATCCGAGAGCGGAAAACTCGAATGAAATTCAGGAAAATGAAATTTCAAAGATAAATATCCTTGAATCTCTTTCCAAAGCGACGGATCCAAATCTCTGTCCGTCCATTGACGATTTAACAGAAAAAACAACGAAAGACGAAAGAAACAGAGCTCCAGAAGCGTCGTTTTCCGAAATCTCTCAAAATAACATGGACTCGAATTTGGTCGTCGTGAATTCGGCATCGACGGTTGATAAAAAACCAAAGGACTTCAAATTCGACTCCGTTCTCGCTTGTTCAGAACATCTCTCGTATGATGAAGATTCGGAGTACTCATCGAGCCACGAAATGACGCTTTCCGAGCTCGAATCAGAGATTTTCCCCAAAAATTCAGATCTAGAGTTCTCAGACTACACTCCGTCCGTTCTGCTCGAATCTCCTAGCGATTTTTCTGAACGAACTGCCGGAAATTCAACTCCGTCCGTTTCTTTCTCGTTATTACTCCAATACACGAAGCAGCTCACCAAATTGAGCTCTCCTCCGGATATCGAAGTCCCCGCGCAAGTTCAAGACGAGTATTTCGAAGAGTTTACGTTTTTGAGGTTCGAGGACGAAGAGCATGAAGAGAGCTACAAGAAATTCAGGGGCAGAGAAAGAAGACAAGTAGTTCTACACAATTACGCCGAGGAATACTGCTCAACCACGGATTACGGCGAACTCGTGCTCCAGCAGCGTTTGCTGATGGTTAACTGGATAGTCGAGGAATCAAATGCGAAGGAATTTCAGTGTGAGACGATGTTCTTAGCGGTTAGCCTCCTTGACCGATTCCTGAGTCATGGATTCTTCAAAAACAAAAGGAAGCTCCAAGTTCTCGGAATAGCTTGTCTCACGTTGGCCACAAGGATCGAAGAAAACCAGCCCTTCAACAGTGTGCGGCAAAAGACGGTCCACGTGGGGAGCAACGTGTACAGCAGATGTGAAGTGGTGGGCATGGAATGGCTGGTGCAGGAGATCCTCAAATTCCAATGTTTCTGGCCCACCACATACAACTTTTTATGGTTCTACTTGAAGGCAGCAAGAGCGGATGCTGAGGTGGAGAAGATGGCAAAGTACCTAGCAACGATTTCGCTGCTTGACCACGGGCGGCTGTGCTACTGGCCCTCAACCGTGGCAGCTGGATTGGTCATCCTAGCTTCCCTGGCAGCCAATCAGGACGACTCATGCGAAAGGATCATGGAGATGTTTGGTGTGGATGGGATATCGAAAAAGAAGTTTGAGATTAATAGGGGGTTTTTGCAGACTCACGTGAGAACGAAAAACGACGATCTACCAGAGTGCATACAGAGCCTGGAGTGGCTGGTGAAATACGTATGTTAA 3057 0.4756 MLTLFFPSTHVSLSLSNPHHRPLSFPGKPATPASLQHHNTELPSSFLPCRQHHPLRAPPEHRQSATHSFRPATSPLLSGNNSSGALSHCMSKTTACTFDLQHPQVRSGLVAPPNTTNVKNQWLPPPRATIPGEKAEKICLFSEHLIFHAKHLQISSLISNKSSSFTTTSNHLHLQMACHLTDPSTFIFHAPPGSHYHSTWSDHTFIIGQSLVDATPINSPRKVLWIISIQMFVAQRYMFERLRGALEMVIGLEDLLADAGVCKAVDEWLVVVARRAIEQILLVAAHGVVEQWLVVVARRAVDQWLVVVACIHTKVEIVVFLPAKMNRNVSPIRQQSSLRRKRKVQVQPVNYVKKLRSKIPRRKRFHISPILSGSVNSLNETTEFSAFPAASSSSSCFPEEISCTSNWISVRSENLKKPRSFRRKRDTEEISGFGAPIHATVQSSRQLEKISDGECQRKTRSYYRQKESEREVVKKSKGDLGVELSESSCVESFSGAEAGFFGKSNEFSERNLKWKARARKIGQKEEESEGNAASAAVSLSEVSCIQSSFQEDSRNLCKSYEFSKKTWHPRAENSNEIQENEISKINILESLSKATDPNLCPSIDDLTEKTTKDERNRAPEASFSEISQNNMDSNLVVVNSASTVDKKPKDFKFDSVLACSEHLSYDEDSEYSSSHEMTLSELESEIFPKNSDLEFSDYTPSVLLESPSDFSERTAGNSTPSVSFSLLLQYTKQLTKLSSPPDIEVPAQVQDEYFEEFTFLRFEDEEHEESYKKFRGRERRQVVLHNYAEEYCSTTDYGELVLQQRLLMVNWIVEESNAKEFQCETMFLAVSLLDRFLSHGFFKNKRKLQVLGIACLTLATRIEENQPFNSVRQKTVHVGSNVYSRCEVVGMEWLVQEILKFQCFWPTTYNFLWFYLKAARADAEVEKMAKYLATISLLDHGRLCYWPSTVAAGLVILASLAANQDDSCERIMEMFGVDGISKKKFEINRGFLQTHVRTKNDDLPECIQSLEWLVKYVC* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01839 1018 PANTHER CYCLINS 701 986 IPR039361 -
Eupl04g01839 1018 SMART cyclin_7 910 996 IPR013763 -
Eupl04g01839 1018 SMART cyclin_7 810 897 IPR013763 -
Eupl04g01839 1018 SUPERFAMILY Cyclin-like 905 969 IPR036915 -
Eupl04g01839 1018 Gene3D - 900 1017 - -
Eupl04g01839 1018 Gene3D - 795 899 - -
Eupl04g01839 1018 ProSitePatterns Cyclins signature. 805 836 IPR006671 -
Eupl04g01839 1018 SMART Cyclin_C_2 906 1013 IPR004367 -
Eupl04g01839 1018 SUPERFAMILY Cyclin-like 763 902 IPR036915 -
Eupl04g01839 1018 MobiDBLite consensus disorder prediction 14 72 - -
Eupl04g01839 1018 Pfam Cyclin, N-terminal domain 798 902 IPR006671 -
Eupl04g01839 1018 Pfam Cyclin, C-terminal domain 906 977 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01839 Eupl-Chr4 40671498 40685814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01839 805 966 Core Cell Cycle Gene Families AT5G25380 35.119 8.28e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01839 K21777 - nnu:104607298 703.745