Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01833 ATGAAAATCAATACGAACGCAGCATGGGATAATTCCACTGGAAAAACTGGTTTGGGTTTTGTGATTAGGGATGCAGCTAATAACTGTTTTATGGCAGGAGGAGACAGTTCTCGATCCTTCTCAGCAGAAGAAGCAGAAGTTCGAGTAATAAGGATGGGCTTGGAAAATGTTACCAAACTTCAAATTAAAGATTGTGTGGTGGAGTCAGATGCGCAGGAGATTGTCCAGGCTCTTCAGATAGGATCTACATCTATGGGATGGTCATCATTAGCACTGTTAGCTGATATTTTGTTTATCTGTAAACTGTTTAATTATGTTGCTTTTTGTTTCTCCCCTCGCGACAGCAACAAGGTCGCCCACTTGATAGCTGATAAGGCAAAAAACTTAACTCACCCAAAATTTGGGAAGCCTCCTTTCCCAATTGGTTGTGCTAGGGAAGATACCTCTAAAGGTGATATTCTGTGTACACTACAGACATTTTGGTATTTCTCCGAAAGAATTATTGAACTCCGGAATAAGATGCTAGGTGACACCAATAAGGTTTCTCACATTGAAAATACCCACCATCCAATGTCCCAACGCATGGCGTCTCTTGCTTCCAACATCCTCAGTCCTCATGCAGGGGACTGGGGGATGAAAGATAGGAGCTGTATCAATCATGACAGGTGGGGCAATTGTTCTGCAAGAGTTGCTAACCTGCTGGTGGTGGGTGTGAATGAAAACGTGCAAAGGCTCTCCAGAAGATTATTAGCAATTCAGGCAGTCCTTGAAGATGCAGAGGCGAAGCAGTTTAATAATAAGAGGATCAACACTTGGCTAAAACAGCTTAAGGATGCAGCTTATGATGCGGACGATGCCTTGGATGAGTGGGCAATTGAAGCCAAAGGTCTACAATCAGCAGCGGAGAGCAGAAATGAGAGCTGCATCAAGCAGGTGAGTGACTCTTTCTTATCTTTTTTCGATATCAAACAATACTGGTTTCGTTGTAAGATGGGGAAAAGAATAAAAAAGATTAGGGAGAATTTTGACGATATTGTGGCAGAAATGTCTGTGTTTGGTTTGAGAGAGGGAGTTGTAGACAGGGAAGCTGAATTCAGAAGGGGCCGAGAGACTAGCGCCAATCTAAGTGAACCAAAAGTTTATGGGAGAGATGAAGAGAAAGAAAATATTGTCGAAGTTCTGCGAAACAATGCGAGTCGTGAAGAAAATGTTTCAGTTCTTCCCATAGTTGGGATTGGTGGCCTTGGTAAGACCACTCTAGCCAAATTAGTCTATAACGATGAAGATGTTACAAAGCATTTTGACGTTAAAATTTGGGTTTGTGTCTCTAATGATTTTGACGTGACAAAGTTTACAAAGGCGGTCATAGAATCTTTATGTAAGACGCGATCTGATCTTGAAAACTTGGACCCTATTCAAGCCCAACTTCGAGAAGAATTGAGTGGGAAGAAATTTTTACTTGTGTTAGATGATGTATGGAGCGAAGATGATGAGAAGTGGAGGACACTGAAAACTTCATTAACTTGTGGAGCTAAAGGAAGTTTTATTATTGTAACTACTCGTTCCGAAAGAGTTGCAAGAATCATGCAAACGCTTCCTCCACATCGCTTGGAAATCCTATCAAATGATGAATGTTGGTTTTTATTCAAGGAACATGCATTTGGCCAAGGGATTGAAGAGCATCAACACTTGATAGATATCGGTAAGCAGATTGCGAATAAGTGTAGAGGTGTACCTTTGGCTGCAAAGGCTCTAGGAAGCTTGATGTGCTTCAAAGAGGATGAAATCCAATGGTTGTCTGTGAGAGACAGTGAAATTTGGCGTCTACCAGAAAATGAAAATAACATTTTACCTGCATTGAGATTAAGTTATATCCATTTGCCTTCACATTTGAGGCAATGTTTTGCTTATTGCTCAATATTTCCGAAAGATCATGTAATGAGAAAAGAAGAACTGATTCATTTATGGATGGCAAATGGTTTTTTGGTTCACTTTAAAGTTGGAATGCAGTTGGAAGATATAGGAAATGAGATTTTCAATGATTTATTATTGAAATCTTTCGTCCAAGACATAGAGAAAGATAAGTATGGCAATATAGAGAAGTGCAAAATGCATGACTTGATGCATGACCTCGCATGTTCTGTTATGGCAAATGAATGTTTCATCATGGAGGATGACAAGGCCATGGAGACTATTCCCAAAGGCCTTCATCATTTGTCACTAGCTTTTGATTCCCATCTATCATCAACCACTCTCGAGTCTCTACCTAAGTCCCAACCATTCTTGCGTTCGTTTCTAAGACTGGGTGGACACCTTTCATTGCAATCCATCTCAAGTCTTAATTGCTTAAGAGTGTTAGATTTAAGTGAATCTTTTTCAAAGATTACAACACTGCCACTCTCAATATGCAACTTGAAACATCTGAGGTACCTCAACCTCTCTTTCACTCGTATCGCATTATTACCTGGGCCCATATGCAGTCTGAAAAATTTACAGATCTTGAAACTAAGATATTGCGAAAAGCTACAAAAGTTGCCCAAAGACATGAGCAAAATGAGTAGCCTCAGACACCTAGACATCTATGGGTGTTCATCATTAACTCACATGCCAAGTGGGATGGGCAATTAA 2628 0.4033 MKINTNAAWDNSTGKTGLGFVIRDAANNCFMAGGDSSRSFSAEEAEVRVIRMGLENVTKLQIKDCVVESDAQEIVQALQIGSTSMGWSSLALLADILFICKLFNYVAFCFSPRDSNKVAHLIADKAKNLTHPKFGKPPFPIGCAREDTSKGDILCTLQTFWYFSERIIELRNKMLGDTNKVSHIENTHHPMSQRMASLASNILSPHAGDWGMKDRSCINHDRWGNCSARVANLLVVGVNENVQRLSRRLLAIQAVLEDAEAKQFNNKRINTWLKQLKDAAYDADDALDEWAIEAKGLQSAAESRNESCIKQVSDSFLSFFDIKQYWFRCKMGKRIKKIRENFDDIVAEMSVFGLREGVVDREAEFRRGRETSANLSEPKVYGRDEEKENIVEVLRNNASREENVSVLPIVGIGGLGKTTLAKLVYNDEDVTKHFDVKIWVCVSNDFDVTKFTKAVIESLCKTRSDLENLDPIQAQLREELSGKKFLLVLDDVWSEDDEKWRTLKTSLTCGAKGSFIIVTTRSERVARIMQTLPPHRLEILSNDECWFLFKEHAFGQGIEEHQHLIDIGKQIANKCRGVPLAAKALGSLMCFKEDEIQWLSVRDSEIWRLPENENNILPALRLSYIHLPSHLRQCFAYCSIFPKDHVMRKEELIHLWMANGFLVHFKVGMQLEDIGNEIFNDLLLKSFVQDIEKDKYGNIEKCKMHDLMHDLACSVMANECFIMEDDKAMETIPKGLHHLSLAFDSHLSSTTLESLPKSQPFLRSFLRLGGHLSLQSISSLNCLRVLDLSESFSKITTLPLSICNLKHLRYLNLSFTRIALLPGPICSLKNLQILKLRYCEKLQKLPKDMSKMSSLRHLDIYGCSSLTHMPSGMGN* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01833 875 SUPERFAMILY Ribonuclease H-like 2 124 IPR012337 -
Eupl04g01833 875 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 638 IPR027417 -
Eupl04g01833 875 CDD RNase_H_like 3 123 IPR044730 -
Eupl04g01833 875 Gene3D Ribonuclease Inhibitor 722 875 IPR032675 -
Eupl04g01833 875 Coils Coil 242 262 - -
Eupl04g01833 875 SUPERFAMILY L domain-like 703 875 - -
Eupl04g01833 875 Gene3D - 1 128 IPR036397 GO:0003676
Eupl04g01833 875 Pfam NB-ARC domain 389 624 IPR002182 GO:0043531
Eupl04g01833 875 Pfam Rx N-terminal domain 234 301 IPR041118 -
Eupl04g01833 875 Gene3D - 227 344 - -
Eupl04g01833 875 Pfam Reverse transcriptase-like 4 126 IPR002156 GO:0003676|GO:0004523
Eupl04g01833 875 Gene3D - 623 714 IPR036388 -
Eupl04g01833 875 PANTHER DISEASE RESISTANCE PROTEIN RP 244 864 IPR044974 GO:0006952
Eupl04g01833 875 FunFam Probable disease resistance protein At1g61300 362 533 - -
Eupl04g01833 875 Gene3D - 539 622 IPR042197 -
Eupl04g01833 875 PRINTS Disease resistance protein signature 406 421 - -
Eupl04g01833 875 PRINTS Disease resistance protein signature 479 493 - -
Eupl04g01833 875 PRINTS Disease resistance protein signature 575 589 - -
Eupl04g01833 875 PRINTS Disease resistance protein signature 850 866 - -
Eupl04g01833 875 FunFam Probable disease resistance protein At1g63360 624 714 - -
Eupl04g01833 875 Gene3D - 369 532 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01833 Eupl-Chr4 40321905 40330124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01833 403 871 WRKY Transcription Factor Family AT5G45050 22.917 2.85e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01833 - - ming:122076305 659.833