Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01830 ATGGCAATAGTCCGAGAACGACGGCAGCTTAACCTTCTTCTCCCCTTGCCGGAAACTGCTGACCTCCGTCCCCGTTTACCTCTACCCCTCCCTCCCACCTCCCTCTCCACCACCACTTCTCAAGAAGCCGATCGCCTCTCTGATCTCGAGAAACTCCAAGTCCTCGGCCACGGAAACGGCGGTACCGTATACAAAGTACGCCACAAGCGCACGTCAGCCGTCTACGCCCTCAAAGTCATCCATGGAGATTGCGATACCACTGTCCGTCGTCAGATCTTCCGCGAGATGGAGATCCTCCGCCGCACCGACTCACCCTTCGTCATCAGATGTCACGGAATCTTCCAGAAACCCGGAGGAGAGATCGCGATCCTCTTGGAGTACATGGACGCCGGTACACTCGACACACTCCTTAACACCAACGGCACCTTCTCTGAATCCTCGCTCGCCAACATCGCTCACCAGGTCCTCAACGGACTTAACTACCTACACGCACACAAGATCGTCCACCGCGACATCAAACCGTCAAATCTGCTTGTTAATCGAAATATGGAGGTCAAGATTGCTGACTTTGGGGTCAGCAAGATCATGTGCCGTATGCTTGATCCGTGTGATTCATACGTTGGTACCTGCGCTTATATGAGTCCTGAACGGTTCGATCCAGACACGTACGGAGCGAACTACAACGGCTACGCTGGAGATATCTGGAGTTTGGGGCTGACGTTGTTGGAACTCTACGTGGGTCACTTTCCCTTTTTGCCCCCAGGGCAGAGACCCGATTGGGCGACGCTAATGTGCGCCATATGCTTCGGGGAGCCACCGATCCTTCCGGAAAGCTCATCGGATGAACTTCGAAGCTTTATTCAGTGTTGCTTGCAGAAGGATTCGAGTCAGAGATGGACAGTGTCGCAGCTCCTATCGCACCCTTTCATCTCCCGGGATCGGAGATCCAATTAA 954 0.5398 MAIVRERRQLNLLLPLPETADLRPRLPLPLPPTSLSTTTSQEADRLSDLEKLQVLGHGNGGTVYKVRHKRTSAVYALKVIHGDCDTTVRRQIFREMEILRRTDSPFVIRCHGIFQKPGGEIAILLEYMDAGTLDTLLNTNGTFSESSLANIAHQVLNGLNYLHAHKIVHRDIKPSNLLVNRNMEVKIADFGVSKIMCRMLDPCDSYVGTCAYMSPERFDPDTYGANYNGYAGDIWSLGLTLLELYVGHFPFLPPGQRPDWATLMCAICFGEPPILPESSSDELRSFIQCCLQKDSSQRWTVSQLLSHPFISRDRRSN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01830 317 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01830 317 ProSiteProfiles Protein kinase domain profile. 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01830 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Eupl04g01830 317 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 38 313 - -
Eupl04g01830 317 Gene3D Phosphorylase Kinase; domain 1 40 123 - -
Eupl04g01830 317 FunFam Mitogen-activated protein kinase 2 130 317 - -
Eupl04g01830 317 SMART serkin_6 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01830 317 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Eupl04g01830 317 CDD PKc_MAPKK_plant_like 47 310 - -
Eupl04g01830 317 FunFam Mitogen-activated protein kinase kinase 30 125 - -
Eupl04g01830 317 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Eupl04g01830 317 Gene3D Transferase(Phosphotransferase) domain 1 124 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01830 Eupl-Chr4 40210572 40212137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01830 1 313 MAP Kinase Kinase Gene Family AT1G73500 63.694 5.72e-142 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Eupl04g01830 Pkinase 3.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01830 K20604 - nnu:104607302 519.62