Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01818 ATGGAACCTTACGTTCTTCTACAAATACACATGAATTCTCTCGTTGTTAATCTCATCACATCATCTCCTTTGCACAAATCAAGTTTCTCTCTCTCTCAATCTAATCCACACCAAGAAATTAACATGGGTTTTCTTCTAGTGTTATGCTTTGCTATTTTAGCTCCTTTCCTCTCCTCCTCCCAAACCCCATTCCTTCTTGTTAACTCAACTCCTTCAAACAGTACCCTCACAGACAAGGAAGCCTTGCTCTCATTCAAGTCTCTAATAACTACCGACCTTTACAACACCCTATCTTCATGGGACCAAAACTCCCCTCTTTGCAACTGGACTGGAGTGGTCTGCAACAATTTCAACCAAAGAGTCGTCGGCCTTGATCTTCGTGACCTCGAATTATCGGGCACCATAAGCCCATATCTTGGAAATCTCTCTTTCCTTCATTCTCTCCACCTACAAAATAACGATTTTGTAGGAACTCTTCCTGATCAAATTGGTTATCTTTCTCGGTTGCAGGTTCTGAATGTGAGCTACAACCGCATTGAAGGTGCAATCCCGCTTAACATAAGCAGGTGCTTGGAGCTATCAGTTCTTGACTTGACGGAAAATGAAATTTCAGGCAAGATTCCTCCAGAGCTCGAGCGCCTTTCCAAACTCCAAGTTCTAAAGTTGAGTCGGAACAAGCTCTCAGGTGCAATTCCCCCATCCATTGGGAACCTTTCTTCACTCACCAATCTAGATTTGATCACCAATACTCTTGGTGGAACGATACCCAATGAATTAGGCCATCTTCAAAACTTAAAACAATTGGCACTTACCGATAACGAGCTCATTGGCACAGTTCCTCCATCCCTATTCAACATTTCTTCCCTCGTCAATTTTATTTTTGCTAAAAACCGACTGTGGGGTGAAATACCAAGTGATGTTGGCGATAAGCTCCCTAATCTTCTTGTGTTCAATTTTTGCTTTAATAAATTCACCGGTGGAATTCCAGTATCACTACACAACCTTACCAAGATCCAAACCCTTCGAATTTCGAATAATTTTCTGGTCGGGTCTGTACCACCAGGACTGGGAAATCTACCTGACCTTCGAACATATAATATAGGGTTCAATCGCATTGTAAGCTCAGGTGATGCTGGACTGAGTTTCATCACTTCCTTGACAAACAGCACCCGTCTTGAGTACCTTGCATTGGATGAAAATCTTCTTGAGGGTGTCATTCCAGAATCCATCGGTAACCTCTCTACCCCTCTCACAAAATTATACTTGGGTGGGAACCAAATTTACGGTCGCATACCTGCCTCGATTAGCCGTCTTAGCAACTTAGCTTTGTTGAATTTGAGTCATAATTCGGTTTCCGGTGAGATTCCACCTGAAATTGGCCTGCTAAAGGAGCTTCAGAAGTTGGGTTTGGCCGGGAACAAAATCTCTGGGGAAATTCCAGCCTCACTCGGAAATCTAAACAAATTGAGTAGCCTTGAGATGTATGGAAATGAGTTGGTGGGAAGAATACCAACCACTTTTGGTAACTACCAACGATTACTTTCATTGGATCTATCAAACAATAGGCTCAATGGAAGCATACCCAAAGAAATTTTCAAGCTCTCCAGTTTAACCTTTATTTTGAACTTATCCAAGAACTCTCTAAGTGGACCTTTGCCTCAAGAAATCGAGGTCTTGGAAAAAGTAGTCACAATAGATCTCTCCGATAATCGCTTTTCTGGAAGTATACCGGGCTCAATCGGGAACTGTAGGAGCTTGGAGAACCTATTCATGGCCAGGAATTTATTCTCGGGGCGTATCCCTAATTCTCTCGGAGAAGTGAAGGCACTGGACACTCTAGACCTTTCCTTAAACCAACTTTCAGGTCCCATTCCCCACGAACTTCAGAAACTTCAGGTCCTTCAGTTATTGAACCTCACTTTCAATAATCTCGAAGGAGAAGTTCCTAAAGATGGAGTCTTTAGAAATACTTCTAGATTTCATCTTGAAGGAAACTTGAAACTTTGCTTGTCAACAGCTTGTGAGAATAGTGGACTTCATGAAAGAAGATCAACTACAATTGGATCTAATAAAATCCTGATCGCAAGCTCAATTGTGGTAGGTGTTTTCGTGGGCGTGTTACTATGTATAATCTTCTATAGAAGAAGATCGAAATTAAAGATCTTGGTGAAAGAAGATTCGATTAAGGGGCAGCATCAAATTGTTTCCTATCAAGAGCTTTGCATGGCGACGGGGAATTTCAATACAGTGAACTTGATCGGAAGTGGGAGTTTCGGATCCGTCTACAGAGGAATTCTCGGAGAAGACATGACAGTTGCAGTCAAAGTCCTCGACCTTGGGAAAACTGGTGCTTCTAAGAGCTTTTTTGCTGAATGTGAAGCTTTGAGGAACGTTCGACACCGGAACCTTGTTAAACTAATTACCTTATGCTCGAGTGTCGATTTTGGGAACTTGGATTTCCAAGCTCTAGTCTATGAATTCATCGGTAATGGGAACTTGGATGATTGGATTCGAGGAAGGAGAAGGCATGTGGGTGGAGATGGTTTGAATGTTTTGGAAAGGTTGAACGTGGCCATTGATATTGCATGTGCCATGGACTACCTTCACCATGACTGTAACGCTCCAGTGGTGCACTGTGACCTTAAGCCAAGCAACATACTCTTATGCGAGGACATGACTGCAAAGGTGGGAGACTTTGGGCTGGCGAGGAAAGTGGTGGAGGCAGCTGGAGATCAGCAATCTATTACCACTACCAATGGTCTCAAGGGCTCCATAGGATATATACCCCCTGAGTACGGGATGGGTGGGAAAGCGTCGACAAGAGGAGATGTTTACAGCTATGGAATAATGTTGCTACAGCTCTTTACTGGGAGAAGCCCCACTCATGAGTCTTTCACAGAAGGGCTAAACTTAGTGAAATGGGTGCTATCAGCCTTTCCCACCAACATTATGGAAGTCTTGGACCCTGAGCTGCTACTACTGATGGGTGGTGTTGGCCACAGAGTCTGGCCCATAAACCTTGAAATTCAGCAGAAATGCTTGGTCTTGATCATCGATGTTGGGCTATCTTGCACCACCTATTTGCCGGATGCACGCATTAGAATGAGAGATGTACTGCACAAACTTAAGGGAATTAGAGACTCTCTCATCAAACCAACTTTAAACTCAAGAATGAGTTGA 3180 0.4321 MEPYVLLQIHMNSLVVNLITSSPLHKSSFSLSQSNPHQEINMGFLLVLCFAILAPFLSSSQTPFLLVNSTPSNSTLTDKEALLSFKSLITTDLYNTLSSWDQNSPLCNWTGVVCNNFNQRVVGLDLRDLELSGTISPYLGNLSFLHSLHLQNNDFVGTLPDQIGYLSRLQVLNVSYNRIEGAIPLNISRCLELSVLDLTENEISGKIPPELERLSKLQVLKLSRNKLSGAIPPSIGNLSSLTNLDLITNTLGGTIPNELGHLQNLKQLALTDNELIGTVPPSLFNISSLVNFIFAKNRLWGEIPSDVGDKLPNLLVFNFCFNKFTGGIPVSLHNLTKIQTLRISNNFLVGSVPPGLGNLPDLRTYNIGFNRIVSSGDAGLSFITSLTNSTRLEYLALDENLLEGVIPESIGNLSTPLTKLYLGGNQIYGRIPASISRLSNLALLNLSHNSVSGEIPPEIGLLKELQKLGLAGNKISGEIPASLGNLNKLSSLEMYGNELVGRIPTTFGNYQRLLSLDLSNNRLNGSIPKEIFKLSSLTFILNLSKNSLSGPLPQEIEVLEKVVTIDLSDNRFSGSIPGSIGNCRSLENLFMARNLFSGRIPNSLGEVKALDTLDLSLNQLSGPIPHELQKLQVLQLLNLTFNNLEGEVPKDGVFRNTSRFHLEGNLKLCLSTACENSGLHERRSTTIGSNKILIASSIVVGVFVGVLLCIIFYRRRSKLKILVKEDSIKGQHQIVSYQELCMATGNFNTVNLIGSGSFGSVYRGILGEDMTVAVKVLDLGKTGASKSFFAECEALRNVRHRNLVKLITLCSSVDFGNLDFQALVYEFIGNGNLDDWIRGRRRHVGGDGLNVLERLNVAIDIACAMDYLHHDCNAPVVHCDLKPSNILLCEDMTAKVGDFGLARKVVEAAGDQQSITTTNGLKGSIGYIPPEYGMGGKASTRGDVYSYGIMLLQLFTGRSPTHESFTEGLNLVKWVLSAFPTNIMEVLDPELLLLMGGVGHRVWPINLEIQQKCLVLIIDVGLSCTTYLPDARIRMRDVLHKLKGIRDSLIKPTLNSRMS* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01818 1059 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Eupl04g01818 1059 Pfam Leucine rich repeat N-terminal domain 77 115 IPR013210 -
Eupl04g01818 1059 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 384 1043 - -
Eupl04g01818 1059 CDD STKc_IRAK 753 1045 - -
Eupl04g01818 1059 FunFam LRR receptor-like serine/threonine-protein kinase EFR 719 827 - -
Eupl04g01818 1059 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 828 1055 - -
Eupl04g01818 1059 SUPERFAMILY L domain-like 76 372 - -
Eupl04g01818 1059 Gene3D Ribonuclease Inhibitor 380 677 IPR032675 -
Eupl04g01818 1059 Gene3D Ribonuclease Inhibitor 72 134 IPR032675 -
Eupl04g01818 1059 Gene3D Ribonuclease Inhibitor 135 379 IPR032675 -
Eupl04g01818 1059 Pfam Leucine rich repeat 391 450 IPR001611 GO:0005515
Eupl04g01818 1059 FunFam LRR receptor-like serine/threonine-protein kinase EFR 381 682 - -
Eupl04g01818 1059 Gene3D Phosphorylase Kinase; domain 1 727 827 - -
Eupl04g01818 1059 SMART LRR_typ_2 262 286 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 462 486 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 214 238 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 166 190 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 335 359 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 631 656 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 510 534 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 559 583 IPR003591 -
Eupl04g01818 1059 SMART LRR_typ_2 438 461 IPR003591 -
Eupl04g01818 1059 ProSiteProfiles Protein kinase domain profile. 747 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01818 1059 Gene3D Transferase(Phosphotransferase) domain 1 828 1055 - -
Eupl04g01818 1059 SUPERFAMILY Protein kinase-like (PK-like) 730 1042 IPR011009 -
Eupl04g01818 1059 ProSitePatterns Protein kinases ATP-binding region signature. 753 775 IPR017441 GO:0005524
Eupl04g01818 1059 Pfam Protein tyrosine and serine/threonine kinase 750 963 IPR001245 GO:0004672|GO:0006468
Eupl04g01818 1059 SMART serkin_6 747 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01818 1059 SUPERFAMILY RNI-like 268 651 - -
Eupl04g01818 1059 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 114 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01818 Eupl-Chr4 39809465 39814903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01818 77 1053 Receptor kinase-like Gene Family AT3G47570 42.502 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Eupl04g01818 PK_Tyr_Ser-Thr 7.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01818 - - nnu:104612143 1246.88