Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01815 ATGGAGTCTCCAATTCAAAGTACTAGCGATCGTGGTTCTTCTCCTTGTGCTTCATCCTTGATGGAAAACATGTTGGGTCTTCTTAGAATTCGGGTCCGTCGAGGCATTAATCTGGCTGTCCGCGATGTTCGGAGTAGCGATCCTTATGTCGTCCTCAAGATGGGTAAACAGAAGTTGAAGACACGAGTAATGAAAAAGAATGTCAATCCTGAGTGGAATGAAGATTTAACTCTTTCTGTTGTAGATCCTAATCTTCCAGTGAAGCTTACAGTGTATGACAAGGACACATTCAGCCTAGATGACAAAATGGGAGATGCAGAATTTGAGATTAAACCATTTCTGGAGGCTTTAAAGATGCATTTGGCAGACCTTCCAAGTGGTACCATAATCACGAGACAGACACCGAGCAGGCAAAACTGCCTGGCTGAAGAGAGCTGCATTATCTGGACCAACGGCAAGGTCTTTCAAGATATTTGTCTGAGACTGAGAAATGTAGAATGTGGTGAAGTGGAACTCCAGCTGCAGTGGATTGACCTTCCTGGTTCCAAGGGCTTATAA 558 0.4409 MESPIQSTSDRGSSPCASSLMENMLGLLRIRVRRGINLAVRDVRSSDPYVVLKMGKQKLKTRVMKKNVNPEWNEDLTLSVVDPNLPVKLTVYDKDTFSLDDKMGDAEFEIKPFLEALKMHLADLPSGTIITRQTPSRQNCLAEESCIIWTNGKVFQDICLRLRNVECGEVELQLQWIDLPGSKGL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01815 185 Gene3D C2 domain 21 183 IPR035892 -
Eupl04g01815 185 Pfam C2 domain 26 113 IPR000008 -
Eupl04g01815 185 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 23 183 IPR044562 -
Eupl04g01815 185 CDD C2_ArfGAP 25 168 - -
Eupl04g01815 185 ProSiteProfiles C2 domain profile. 9 126 IPR000008 -
Eupl04g01815 185 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 26 170 IPR035892 -
Eupl04g01815 185 SMART C2_3c 27 133 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01815 Eupl-Chr4 39472665 39489760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01815 58 185 C2H2 Transcription Factor Family AT1G70790 63.077 5.83e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01815 - - vvi:100261135 297.36