Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01813 ATGAAGAGAGAGCACCAAGAAAGCAGCGGTAGTGGTAGCGGTAGTGGTAGCGGTAGCGGTAGCGGTGGTGGAGCTTATTCAATGGCGGCTTCAGGGAAGAACAAGATGTGGGACGAAACTCATCAACAAGACGCCGGTGTTGATGAGCTACTTGCAGTTTTAGGTTACAAGGTTAGATCCTCCGATATGGCTGAGGTTGCTCAGAAGCTTGAGCAGCTGGAGATGGTGATGGGGAATGCTCAAGAGGATGGACTTTCTCATCTTGCATCTGAGACCGTTCATTACAACCCTTCTGATCTCGCTACATGGCTTGAATCTATGCTCTCCGAGCTTAACGCTCCCCCCAATTTTGACACCTCTACGGTTCAATTGCAATCGATCGACGATCCCCTTCTCACTCCAGCTGAATCTTCCACCATCACTACTGTTGATTTCCCCAATACTAGGCAGCAACATCAATCGCGGATCTATGATGAACCCACTTCTGATTATGATCTCAGAGCAATCCCCGGTGGGGCCATTTATGGACAGGTGGAACCGGAAAGGGAGAAGAAGCGGATGAAGCACTCGTCGGTAACAGCTTCAGCATCCTCATCGTCTGCGGTGTTGGGGACTGGGGTTTCGAGTCTTTCGACCGAATCGGCTCGGCCGGTTGTACTTGTCGATTCGCAGGAGGCCGGGATCCGACTCGTCCACACCTTGATGGCTTGCGCGGAGGCCGTTCAGCAAGATAATATCAAGGTCGCTGATGCTCTCGTCAAACAGATTGGATTGCTGGCCGTGTCCCAAGCCGGAGCCATGAGGAAAGTCGCGACCTACTTCGCCGAAGCCCTTGCGCGTCGAATTTACCGATTGTACCCTCAGGAGTCGCTCGAGTCGTCCTTCTCCGATATCCTTCAGATGCACTTCTACGAGACCTGCCCGTACCTGAAATTCGCTCATTTCACAGCGAATCAGGCTATTCTCGAGGCTTTTGCTGGGAAGAGCAGAGTCCACGTTGTTGACTTCAGTATGAAACAAGGGATGCAGTGGCCGGCGTTGATGCAGGCCCTTGCCCTTCGTCCTGGGGGCCCACCGGCCTTCCGATTAACGGGCATCGGTCCACCGCAGCCGGACAACAACGATGCGTTACAACAAGTTGGGTGGAAATTAGCCCAGTTGGCTGAAACGATTCATGTTGATTTCGAGTTTAAAGGGTTCGTAGCGAACAGCCTAGCGGACCTCGACGCGTCCATGTTCGAGATCCGTCCCAGCGATGTCGAGGCTGTGGCGGTTAATTCAGTATTCGAGCTGCACCGATTGCTCGCCCGGCCTGGTGCGATCGACAAGGTGCTTTCTTCCATAAAGGCGATGCGGCCGAAAATTGTTACGGTTGTGGAGCAGGAGGCGAACCACAATGGGCCGCTGTTTCTAGACCGGTTCACGGAATCGCTTCACTACTACTCGACTCTGTTTGACTCGTTGGAAGGGTGTGGGATGTCTCCACCTAATAGTCAGGACCAGGTAATGTCGGAAGTGTATTTGGGTCGGCAGATCTGCAACGTGGTAGCCTGCGAGGGGGCGGAGCGGGTGGAGCGACACGAGACTTTGAATCAATGGCGAACAAGGATGGGTTCGTCCGGGTTTTCCCCGGTTCACCTCGGATCCAACGCGTTCAAGCAGGCTAGTATGTTGTTGGCCTTATTTGCAGGTGGCGATGGCTACAGAGTGGAAGAGAACAATGGGTGTCTCATGCTTGGTTGGCATACTCGCCCACTCATCGCCACGTCGGCTTGGCAACTTGCCTCCACCGATCCCCAATGA 1803 0.5369 MKREHQESSGSGSGSGSGSGSGGGAYSMAASGKNKMWDETHQQDAGVDELLAVLGYKVRSSDMAEVAQKLEQLEMVMGNAQEDGLSHLASETVHYNPSDLATWLESMLSELNAPPNFDTSTVQLQSIDDPLLTPAESSTITTVDFPNTRQQHQSRIYDEPTSDYDLRAIPGGAIYGQVEPEREKKRMKHSSVTASASSSSAVLGTGVSSLSTESARPVVLVDSQEAGIRLVHTLMACAEAVQQDNIKVADALVKQIGLLAVSQAGAMRKVATYFAEALARRIYRLYPQESLESSFSDILQMHFYETCPYLKFAHFTANQAILEAFAGKSRVHVVDFSMKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNNDALQQVGWKLAQLAETIHVDFEFKGFVANSLADLDASMFEIRPSDVEAVAVNSVFELHRLLARPGAIDKVLSSIKAMRPKIVTVVEQEANHNGPLFLDRFTESLHYYSTLFDSLEGCGMSPPNSQDQVMSEVYLGRQICNVVACEGAERVERHETLNQWRTRMGSSGFSPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQLASTDPQ* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01813 600 FunFam DELLA protein GAI 46 111 - -
Eupl04g01813 600 SMART DELLA_2 48 121 - -
Eupl04g01813 600 Coils Coil 63 83 - -
Eupl04g01813 600 ProSiteProfiles GRAS family profile. 221 593 IPR005202 -
Eupl04g01813 600 Pfam Transcriptional regulator DELLA protein N terminal 48 115 IPR021914 -
Eupl04g01813 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 183 589 IPR005202 -
Eupl04g01813 600 MobiDBLite consensus disorder prediction 8 24 - -
Eupl04g01813 600 MobiDBLite consensus disorder prediction 1 35 - -
Eupl04g01813 600 Gene3D - 46 111 IPR038088 -
Eupl04g01813 600 Pfam GRAS domain family 230 593 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01813 Eupl-Chr4 39286297 39288619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01813 1 596 GRAS Transcription Factor Family AT2G01570 63.548 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl04g01813 GRAS 9.3e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01813 K14494 - nnu:104609975 976.852