Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01802 ATGGGTTTTTGTTATTTTCTCCATAGCTTGTTTTGGGTCCAATCTGTCTCTGAAAAGGTATCACATCTATGTTGTTTTTTGAACTTGGTTATTCATTTTTTTGTAATTGGAGATTGGTGGGTCATGCATAAAACTTATAGAGAATTGTCACTTCTTTTTTCTGACCTTGCAGTATCCACGAGAGGTTCTGGAATGCAGTGGCCCTTCTTAAACAAGAAAAACTTCAATCTCAATGGGCAAGGGGGTACACATTATGCAATGATGGCTTATCCTGTGAAGCATGTTGATCATAGTTTGGTCCATCGTCCTAACGAATTTAGCTCTTTTTCAGTCTCCAACCACATGATTTCGGTTGCTCATAACGACTCTGTCTTGAAAACCCATGTTGTCACTACTGGCCACAACTTAGCTGCCACCACTATGAAGCAAGAACCACTTGGAGGAATTCCGGTTACAGCCTCACATTCTATCATTCCTATTGCAGGTTCCTTTACTGGAACTGCTGATCCAAGGAACATTTTGAAGCCTGCGGGGGCACCTGCTCAACTGACCATCTTTTATGCGGGTTCCATGAGTATCTATAATGATGTCCCTCCTGAGAAGGCTCAAGCTATTATGTTCTTGGCCAGGAATGGGTCTTCCATGAACGATAACACTACAACCCCCAGAGCTCAAGTTCAGGCACCAACACCAAAGCCAGTAGGAGTTGATGGTTTTCATGGGAACCATTCCCATTCTACATCTCCTCGCTCGGGTCTTTCAAGCCCTACCTCTGTTACTTCACATGTCGGTGCTCACTCAGGGACATGTAGTAGTACTGGTGAATTGATGGCAGCAAAGCCCCTAGGAGCTTCAATGGCTCCTAATAGCCAACCAGAGCCTCTAAAATTAGTCACTTCAATAGGTTCTGCCGCTACAACTCTAATGCCGACAGCTGTTCCTCAGGCTCGCAAAGCATCATTGGCTCGGTTTCTGGAGAAGCGCAAAGAGAGGGTGATGAACAAGCTGCCTTACATGAACAAGAAATCGCCCGAGAGCATAACAACCCCGGATAGCACTACAACCACCCGAACCGATGGTGTTAGATTCCCTGGAAATTCTATGTAG 1107 0.4499 MGFCYFLHSLFWVQSVSEKVSHLCCFLNLVIHFFVIGDWWVMHKTYRELSLLFSDLAVSTRGSGMQWPFLNKKNFNLNGQGGTHYAMMAYPVKHVDHSLVHRPNEFSSFSVSNHMISVAHNDSVLKTHVVTTGHNLAATTMKQEPLGGIPVTASHSIIPIAGSFTGTADPRNILKPAGAPAQLTIFYAGSMSIYNDVPPEKAQAIMFLARNGSSMNDNTTTPRAQVQAPTPKPVGVDGFHGNHSHSTSPRSGLSSPTSVTSHVGAHSGTCSSTGELMAAKPLGASMAPNSQPEPLKLVTSIGSAATTLMPTAVPQARKASLARFLEKRKERVMNKLPYMNKKSPESITTPDSTTTTRTDGVRFPGNSM* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01802 368 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 123 349 IPR040390 -
Eupl04g01802 368 MobiDBLite consensus disorder prediction 340 368 - -
Eupl04g01802 368 Pfam Jas motif 314 338 IPR018467 -
Eupl04g01802 368 ProSiteProfiles Tify domain profile. 176 211 IPR010399 -
Eupl04g01802 368 MobiDBLite consensus disorder prediction 341 368 - -
Eupl04g01802 368 MobiDBLite consensus disorder prediction 241 272 - -
Eupl04g01802 368 Pfam tify domain 179 209 IPR010399 -
Eupl04g01802 368 SMART tify_2 176 211 IPR010399 -
Eupl04g01802 368 MobiDBLite consensus disorder prediction 215 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01802 Eupl-Chr4 38317509 38322344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01802 128 343 Tify Gene Family AT3G17860 40.444 6.48e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Eupl04g01802 tify 2.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01802 K13464 - nnu:104607376 313.153