Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01796 ATGAGGTCTTATTCTCATCTCAGTCTTTTTCTCTTTCTTTTCCTCTGGTTTTTCCGTCTCGGAAAACCAGATCTTTTGTCAGACAAAAACGCTCTTCTCGCCCTTCGATCGGCCGTCGGTGGAAAATCTCTCCAGTGGAACCAATCCCAACCGGATCCATGTATGTGGCAAGGCGTCAACTGCGAGGGAAACGGTGTCACCGGCCTCCGCCTCCCCGGTTTTGGACTCTCCGGCGAAATCCCATCGGGTATCATCGGAAATATGACTCACCTCCGTAATCTCTCCCTCCGTCTTAATGCCTTGACTGGCCAACTCCCGTCCGATCTCGTCCTCTGTACTGACCTCCGCAACCTCTACTTGCAGGGCAACGACTTTTCCGGTGAGATTCCGACGTTTCTGTTCGGGCTTTATAACCTCGTTCGGCTGAATCTTGCCGGGAATAATTTCACCGGAGAGATATCTCCGGCAATCAACAACCTTACCAGGTTGGGCACTCTGTACTTGGAGAACAACCAACTAACTGGTTCGATTCCGGAGTTGAATCTTCCCAATCTTGTTCAATTCAATGTGTCCAATAATCGGTTGAACGGTTCAATCCCGTTGAAGCTTCGATCGATGAACGCAGACGCATTCGAGGGGAATTCGCTCTGTGGGGGACCTCTTGGGTCTTGCCCTGGTGAAGGAAATTCCACGAATGAGAGCAAAAAGAAGAACTTGTCCGGAGGAGCAATTGCCGGCATTGTGATTGGATCGGTGGTTGGGTTTCTTTTGATTCTTCTATTATTGTTCATTTTCTGTCGGATGAAGAGTAGTAGAAAGACGGGATCAGTAGACATTGCGTCTGCGAAGCACCCCTCAGAAGTTGAAATTCCAGACGAGAAAACAATGAGTAGAGGGTATCCGGTAGCTGCCACGACAATGGCGGGAGGAGCAGCAAAAGCGGAAATTGGCAATAGTGGGCTTAAGAAGTTAGTGTTCATTGGAAATGCGGCTAGGCATTATGACCTGGAGGATCTGTTGAGGGCATCTGCTGAAGTTTTGGGGAAAGGGACATTCGGGACGGCGTACAAGGCAGTTTTGGAGGTTGGGGCTGTTGTGGCTGTAAAAAGGTTGAAGGATGTAACCATTTCGGAGAAGGAATTCAGGGTGAAGATTGAGGCAGTTGGATCAATGAATCACGAACATCTTGTCCCACTTAGGGCCTACTATTACAGTAAGGATGAAAAGCTTCTTGTCTATGATTTCATGCCCATGGGAAGCTTATCTTCACTTTTGCATGGAAACAGAGGAGCAGGTAGAACTCCATTGAATTGGGAAACCCGATCCAGCATAGCCCTTGGAGCTGCCCGTGGTATCGAATACCTCCACTTGCAGGGCCCCAATGTCTCCCACGGTAGCATCAAGTCCTCCAATGTTCTCCTCACAAAATCATACGATGCCCGTGTCTCTGACTTTGGCCTAGCACACATTGTTGGCCCCACATCCACTCCCAACCGTATTGCTGGCTACCGTGCACCGGAGGTCACAGACGCCCACAAGGTCTCTCAGCAGGCTGATGTCTACAGTTTCGGCGTCCTGCTCTTGGAGCTGCTGACTGGCAAAGCTCCCACCCATGCCCTCTTGAATGAAGAGGGGGTTGACCTCCCAAGGTGGGTGCAGTCTGTGGTTCAAGAGGAGTGGACTGCTGAGGTTTTTGACCTTGAGCTCCTGAGATACCAGAACATCGAGGAGGAGATGGTTCAGCTCCTACAGCTTGCAATAGACTGTGTCGCACAGTACCCGAACAAACGTCCTTCAATGTCTGAGGTGGCACGGCAAATTGAGGAGCTCCGTCTTTCCAGCCTAGAGCAAGAGTATAACCCACAGACCGATCTGGTTGATGATACAGATGATGTTTCTTCAAGACGAACCAATTCAATTGGATCAGGTCCACCACCATCTTCGCATATGGATTGA 1956 0.4985 MRSYSHLSLFLFLFLWFFRLGKPDLLSDKNALLALRSAVGGKSLQWNQSQPDPCMWQGVNCEGNGVTGLRLPGFGLSGEIPSGIIGNMTHLRNLSLRLNALTGQLPSDLVLCTDLRNLYLQGNDFSGEIPTFLFGLYNLVRLNLAGNNFTGEISPAINNLTRLGTLYLENNQLTGSIPELNLPNLVQFNVSNNRLNGSIPLKLRSMNADAFEGNSLCGGPLGSCPGEGNSTNESKKKNLSGGAIAGIVIGSVVGFLLILLLLFIFCRMKSSRKTGSVDIASAKHPSEVEIPDEKTMSRGYPVAATTMAGGAAKAEIGNSGLKKLVFIGNAARHYDLEDLLRASAEVLGKGTFGTAYKAVLEVGAVVAVKRLKDVTISEKEFRVKIEAVGSMNHEHLVPLRAYYYSKDEKLLVYDFMPMGSLSSLLHGNRGAGRTPLNWETRSSIALGAARGIEYLHLQGPNVSHGSIKSSNVLLTKSYDARVSDFGLAHIVGPTSTPNRIAGYRAPEVTDAHKVSQQADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVQEEWTAEVFDLELLRYQNIEEEMVQLLQLAIDCVAQYPNKRPSMSEVARQIEELRLSSLEQEYNPQTDLVDDTDDVSSRRTNSIGSGPPPSSHMD* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01796 651 Gene3D Ribonuclease Inhibitor 27 135 IPR032675 -
Eupl04g01796 651 FunFam pollen receptor-like kinase 1 311 415 - -
Eupl04g01796 651 Gene3D Phosphorylase Kinase; domain 1 309 415 - -
Eupl04g01796 651 ProSiteProfiles Protein kinase domain profile. 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01796 651 Pfam Protein kinase domain 344 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl04g01796 651 CDD STKc_IRAK 347 610 - -
Eupl04g01796 651 FunFam Probable inactive receptor kinase At1g48480 416 618 - -
Eupl04g01796 651 FunFam Probable inactive receptor kinase RLK902 25 181 - -
Eupl04g01796 651 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Eupl04g01796 651 PANTHER OS05G0588300 PROTEIN 9 616 - -
Eupl04g01796 651 MobiDBLite consensus disorder prediction 635 651 - -
Eupl04g01796 651 SUPERFAMILY L domain-like 32 206 - -
Eupl04g01796 651 MobiDBLite consensus disorder prediction 618 651 - -
Eupl04g01796 651 Gene3D Ribonuclease Inhibitor 136 219 IPR032675 -
Eupl04g01796 651 Pfam Leucine rich repeat N-terminal domain 27 61 IPR013210 -
Eupl04g01796 651 SUPERFAMILY Protein kinase-like (PK-like) 345 607 IPR011009 -
Eupl04g01796 651 Gene3D Transferase(Phosphotransferase) domain 1 416 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01796 Eupl-Chr4 38008477 38011791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01796 24 620 Receptor kinase-like Gene Family AT1G48480 62.279 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl04g01796 Pkinase 3.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01796 - - nnu:104607380 868.996