Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01793 ATGGTCACGAGAGCAAAGAAACATCAAAGCCTTTCCCTCATGTCCTTCCTCTCAGCTGCAGCTTTATTGTTCCTTCTCCCAGTAATATCAGCCATCGATCCTTCAAATCCCAATTGCAAAGCCAATGACAGTGATTTCATCCGCACAAGCTGCAGCGCAACTTTATATCCCGACCTCTGCTATACCTCGCTCTCCGGCTACGCCAACGCCGTTCAACAAAGCCCGGCCCAGCTAGCGCGCGTCGCCGTTGCGGTCAGCCTCTCCAAAGCTCGGCGAATGGCTACCTACGTTTCGAACCTCTCGCGTGAAGCAGATTCTGGAACCGAGCCTCGAGCCGTGGCCGCGCTACACGACTGCTACAGCACCTTCGGCGACGCTGTTTATGAAATACAACGGTCACTGAGGGAGATGCGTCATCTGAATACGGGAGAATCGTTGAGATTTCAGATGAGCAATGTGCAGACCTGGATGAGCGCCGCTCTGACAAACGAGGATACGTGTACGGATGGATTCGATGTGGTGTCTGAAGGACCATTGAAATCAGACGTTTGTAATCGAGCCTCGAACGTGAAGAAGTTTACGAGCAATGCGCTCGCGCTGGTTAATAGCTTCGTTGCCAAGGAAATTAATTGA 633 0.5182 MVTRAKKHQSLSLMSFLSAAALLFLLPVISAIDPSNPNCKANDSDFIRTSCSATLYPDLCYTSLSGYANAVQQSPAQLARVAVAVSLSKARRMATYVSNLSREADSGTEPRAVAALHDCYSTFGDAVYEIQRSLREMRHLNTGESLRFQMSNVQTWMSAALTNEDTCTDGFDVVSEGPLKSDVCNRASNVKKFTSNALALVNSFVAKEIN* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01793 210 SMART PMEI_2 42 200 IPR006501 GO:0004857
Eupl04g01793 210 Pfam Plant invertase/pectin methylesterase inhibitor 45 200 IPR006501 GO:0004857
Eupl04g01793 210 NCBIfam pectinesterase inhibitor domain 15 202 IPR006501 GO:0004857
Eupl04g01793 210 CDD PMEI-like_3 49 204 - -
Eupl04g01793 210 FunFam Pectin methylesterase inhibitor 1 42 204 - -
Eupl04g01793 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 204 IPR035513 -
Eupl04g01793 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 200 - -
Eupl04g01793 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01793 Eupl-Chr4 37986493 37987488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01793 46 209 Carbohydrate Esterase AT1G53830 28.070 1.74e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01793 - - vvi:100247498 256.529