Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01751 ATGAGGAAACCTTGTTGTGATAAGCAAGATAAGAACAAAGGAGCTTGGTCGAAGCAAGAGGACCAGAAGCTCATTGATTACATACGAGCTCATGGCGAAGGTTGCTGGCGCTCCCTCCCTCAGGCAGCAGGCTTGCTTCGCTGTGGTAAAAGTTGCAGGCTGAGATGGATAAATTACCTAAGGCCGGACCTTAAACGAGGCAACTTTGGTGAGGATGAAGAGGACCTAATCATCAAGCTCCATGCACTATTAGGCAATCGGTGGTCACTGATAGCTGGGAGGTTACCAGGACGCACAGACAATGAGGTGAAGAACTACTGGAACTCTCATTTAAGGAGAAAACTGATAAGCATGGGTATGGATCCCAATAACCATCGCTTGAGCTACAACATACGTCCTCCTCAAAATCAATTGGACTCAGGTAGTTCCACATCTTCTGGGTCGAAGAACCAGGCATCTCAGCCTATGAAATCACATGGCATTAATGATCAGGTGTCTGATGCTGCCAGCTCCCTGGAAGACGATACACGCGCCTTGCCCGACTTGAATCTTGATCTCACCATGACCATTCCTTCTCCTCATACTCACATAGATGGGATACAACATGTGGAGTCGAAAATAGCAAGGGAACTCGAAAATGCCTCCTCTCCCACACTTCTTCTCTTTAGCTGA 672 0.4747 MRKPCCDKQDKNKGAWSKQEDQKLIDYIRAHGEGCWRSLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFGEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLISMGMDPNNHRLSYNIRPPQNQLDSGSSTSSGSKNQASQPMKSHGINDQVSDAASSLEDDTRALPDLNLDLTMTIPSPHTHIDGIQHVESKIARELENASSPTLLLFS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01751 223 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Eupl04g01751 223 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Eupl04g01751 223 Gene3D - 13 65 - -
Eupl04g01751 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Eupl04g01751 223 CDD SANT 68 111 IPR001005 -
Eupl04g01751 223 Gene3D - 68 157 - -
Eupl04g01751 223 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Eupl04g01751 223 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 157 - -
Eupl04g01751 223 MobiDBLite consensus disorder prediction 131 173 - -
Eupl04g01751 223 CDD SANT 15 60 IPR001005 -
Eupl04g01751 223 FunFam MYB transcription factor 67 128 - -
Eupl04g01751 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Eupl04g01751 223 MobiDBLite consensus disorder prediction 131 171 - -
Eupl04g01751 223 FunFam MYB-related transcription factor 12 65 - -
Eupl04g01751 223 SMART sant 65 113 IPR001005 -
Eupl04g01751 223 SMART sant 12 62 IPR001005 -
Eupl04g01751 223 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Eupl04g01751 223 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01751 Eupl-Chr4 33764735 33766488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01751 2 199 MYB Transcription Factor Family AT4G38620 54.460 6.20e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl04g01751 Myb_DNA-binding 5.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01751 K09422 - ming:122083541 350.132