Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01739 ATGGCGGTGTATGCCCATAGAGACGATAGCAAAGCTGAAGAAGAAATATATGACGAAGGAGACGCTTTTGACGAAGACATGGAAACCCTTAGGAGGGTTTGCATGTTAACCGGAACAAAGCCTAACGAAATCGAAGCCGCCGACACCGACTCCGGTTCCGAAGGCGAGAGCAGCGAAATGGACGATCTGGAATTGGTTCGAAACATACAACAGCGATTCTCGCTTCCTTCAGACGCCAATCCGCCACTCTTCTTGAAACCTCTGAGCTCTCTTCCGCCGATTGTCTCGGACGATGATGAAGATGATTTTGAAACCCTCCGTGTGATTGAGAGGCGGTTCTCCAAGTACGATTCCGATGCCCTGAAAAAGAAAACGGAGAACCATTTAAATGAACAACCTGAGCTGGTTCATGGTATTAGCATAGCATCAGAACAGGAAACTCCCAATATTCTTTTTGTAGACAGAAATTATGGCGAGGCTTCGGGTGAGGAGTTTCCAGATTCTGAAGAAGCTTGTAACACCTCCCAGCCTTTGGAATCTTTTAGTGACACAGGTCATGGAAAGCCACTTTCTGGCTTCATTGAGCGGCGATCAGAAGTTTCTGAGTCATCGATGCTTCCTCTGAAGTATTCTAGCTTCCCTAACCCTAAATCTGCACAGGTGTTCATTGATGCCATTAAGAAGAACAGGTCATGTCAGAAATTTATTAGGAGTAAGCTGATACAGGTCGAAGCAAGGATTGAAGAGAACAAGAAACTGAAGGAACGTATCAAAGTCCTTAAGGACTTCCAGCTTTCATGCAAAAAAAGAGCCGGGAGAGCTTTATCCCAAAAGAAGGATGCTCGTGTTCAGCTAATTTCAGTTCGAAAGTCCAGGATTTCTCAGAATTTGAAGGTCAATGATAAGAAGGTTCGTGCCTTATATTTTGGCCCAGCTGAGAATTCTCATGCTGCCAATTATAGGATGGTGTTGACAAAATTTCCACTCTCACTGGGTAGGCAACGTTGGTCAAAGGTAGAGAAGGAAAATCTTGAAAAGGGAATAAAACAACAATTTCAAGAAATGTTGCTTCAGAAATCAGTGGAAGTCTATAGGGATTATGAGGAATCTTCGGACGATCCAACTGCTTTCGATGAAATCATTTCATCAATCACAGATCTTGAAATCACACCTGAAAATGTTAGATCCTTTCTGCCTAAGGTTGATTGGGAGCGGTTGGCGTCCATGCATGTTGTGGGCCGTTCTGGTGCAGAATGTGAAGCAAGGTGGTTGAACAGTGAAGATCCTCTAATCAATCACAATTCATGGACCAATAATGAGGATAAGAAATTTTTATTTATTCTTCAGCAAAGGGGCCTTTTTAACTGGATCGACATCGCAATTACATTGGGGACAAATAGAACCCCCTATCAGTGCTTGGCTCGTTATCAACGGAGTCTTAATGCACTCATTATGAAGCGGGACTGGACAGAAGATGACGATGCTCAACTTCGCGTTGCTGTAGAAGCTTTTGGTGAAAGTGATTGGCAGCTAATAGCTTCTAATTTGGTAGGAAGGACAGGCACTCAGTGTTCTAATAGATGGAGGAAAACTCTTCACCCTTCTAGGAAAAGGGTGGGGAGGTGGACTGTGGATGAAGACAAACGCTTGAAAGTAGCTGTGATGCTTTTTGGGCCCAAAACCTGGAAGAAAATAGCTCAATTTGTCCTTGGTCGAACACAAGTTCAATGTAGAGAAAGATGGGTCAATGTTCTAGATCCATTGTTGAATCTGGAGGAATGGACCAAAGAAGAGGATTCTAGGTTGAAAGCTGCAATTACAGAACATGGGCATTGCTGGTCTAAAGTTGCAGCATCTGTGCCTCCACGTACCGACAGTCAGTGCAGGAGGAGATGGAAGGTTTTGCTTCCACATGAAGTGCCTTTGCTCCAAGAAGCTCGAAAGATACAGAAAGCTGCTTTTATATCCAACTTTGTAGATCGGGAGTCAGAACGACCTGCACTTGGCCCTAGTGACTTTCTTCCATTACCAGGGATAAATCCTATTCCTGAAGCTGAAAATGGAAGCAATAGTGGCAAAGAAAAGAAAAAATCACGAGAGAGGCCAAACTGTAAGAAGCAAAAGGATATGGTTTCTTGTGATGTTCGGAAGAAGATTAGCTCCAAAAGGTCTAAAATCAAAGCTCAAATTTGTCCTGAAAAGGTTTTGAGGATAACAAATAGTGATGATGTTGAGACCTTAGATGGTGATGATACTGCTTCAAAAAAGAAGGCGGCAAAGACATCTAAGCTACCTCCGAAGAGGTATAAATGTACTGGACCAGCAGCGGGCCACCAAAAGTTGCCATTCACTCCTGAGCATTCAAGCTTTTTAGGGGTGACCAATGGTGATGATGTTGAGAACTTTGATGAGAATGATACCACTTCAAAGAAGAAGAAAAGGACGCCTAAGCCACATTCAAAGAAGAATAAATGTATTGAACCAGCACAGGACCACCAAGATGTTTCATTATCTCCTGAAAATTTGACACTTGTAAGGATAAATAATGGTGATGACATTGAGACATTTGGTGGAGACAATACCACCCAAAAGAAGAAGAGGAAGGCATCCAAGTCACGTTCAAAGTCACTTGAATTTATTAAAAAGGACGACCAGGCTGCTTCCTCTCTTGGGGGAAAGAGGAGGAAGAAGGCACCTGAGCTGTTTTTTGAGAGAGAGAGCTTTGTTCAGGACCAAGAGGATCCACAGCTTCCTGGACATTCAGGTTTGGAAATATTGGACGTTGGTGATGCTTCTTTACATGGAATGTCAGTGAGGGAGGATGCCCCTCAACTGGGTAGCTCTAGAAAAGCACGTAGTAGAGAAAAAATCTCGAGTACAACAGCAGATTGTGACAAAAAGAAGCAAAAGCACAGGGCTTCGTTGCATGGAAATGATGTGTCCACTGACTCCTCTCAGCCAAGTGAAACTATTTCACTCAGAAGGGTGAAGCAAAAACTTCAAAGAAGCTCGGCAATCACATCCAAATCTTTTGACGCATTTGGATGTGAATTTGGTGAGGAACAACATGAACGTCATGTTGTGAATGGAGTGCCTACCCTCACACAAGATTGCGAAACTCAGACATGCTGGAATAGTGGAATGACCAAAATAATGACCTCTCACGATACACAGTCAAGTCAGCCCGGGAACATCTTAGCCATAGTAACTGTTGGCAATGTACATGCTGGGAAGGATTTGGAGGGTAGAATTGTTTGTCCCTATGAAACCGTGGATGAAGTGGCAAGTATCAATCCGGAAAGGAGTTGTGGAGCTGATGATGATTGTGCTTTTTCACCCACTTCCAACTCTTCGCCTCACCCTGTATTTGGAGGTCATACAAATGGAGCACTGGATGTAGCATTTCATATGGAGGTAGAAACGGTTGAACCCACCCACTGA 3441 0.4359 MAVYAHRDDSKAEEEIYDEGDAFDEDMETLRRVCMLTGTKPNEIEAADTDSGSEGESSEMDDLELVRNIQQRFSLPSDANPPLFLKPLSSLPPIVSDDDEDDFETLRVIERRFSKYDSDALKKKTENHLNEQPELVHGISIASEQETPNILFVDRNYGEASGEEFPDSEEACNTSQPLESFSDTGHGKPLSGFIERRSEVSESSMLPLKYSSFPNPKSAQVFIDAIKKNRSCQKFIRSKLIQVEARIEENKKLKERIKVLKDFQLSCKKRAGRALSQKKDARVQLISVRKSRISQNLKVNDKKVRALYFGPAENSHAANYRMVLTKFPLSLGRQRWSKVEKENLEKGIKQQFQEMLLQKSVEVYRDYEESSDDPTAFDEIISSITDLEITPENVRSFLPKVDWERLASMHVVGRSGAECEARWLNSEDPLINHNSWTNNEDKKFLFILQQRGLFNWIDIAITLGTNRTPYQCLARYQRSLNALIMKRDWTEDDDAQLRVAVEAFGESDWQLIASNLVGRTGTQCSNRWRKTLHPSRKRVGRWTVDEDKRLKVAVMLFGPKTWKKIAQFVLGRTQVQCRERWVNVLDPLLNLEEWTKEEDSRLKAAITEHGHCWSKVAASVPPRTDSQCRRRWKVLLPHEVPLLQEARKIQKAAFISNFVDRESERPALGPSDFLPLPGINPIPEAENGSNSGKEKKKSRERPNCKKQKDMVSCDVRKKISSKRSKIKAQICPEKVLRITNSDDVETLDGDDTASKKKAAKTSKLPPKRYKCTGPAAGHQKLPFTPEHSSFLGVTNGDDVENFDENDTTSKKKKRTPKPHSKKNKCIEPAQDHQDVSLSPENLTLVRINNGDDIETFGGDNTTQKKKRKASKSRSKSLEFIKKDDQAASSLGGKRRKKAPELFFERESFVQDQEDPQLPGHSGLEILDVGDASLHGMSVREDAPQLGSSRKARSREKISSTTADCDKKKQKHRASLHGNDVSTDSSQPSETISLRRVKQKLQRSSAITSKSFDAFGCEFGEEQHERHVVNGVPTLTQDCETQTCWNSGMTKIMTSHDTQSSQPGNILAIVTVGNVHAGKDLEGRIVCPYETVDEVASINPERSCGADDDCAFSPTSNSSPHPVFGGHTNGALDVAFHMEVETVEPTH* 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01739 1146 CDD SANT 541 585 IPR001005 -
Eupl04g01739 1146 ProSiteProfiles Myb-like domain profile. 428 480 IPR001005 -
Eupl04g01739 1146 ProSiteProfiles Myb-like domain profile. 534 585 IPR001005 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 744 895 - -
Eupl04g01739 1146 Gene3D - 483 537 - -
Eupl04g01739 1146 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 533 589 IPR017930 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 939 996 - -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 168 182 - -
Eupl04g01739 1146 ProSiteProfiles Myb-like domain profile. 481 532 IPR001005 -
Eupl04g01739 1146 Gene3D - 541 590 - -
Eupl04g01739 1146 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 594 640 IPR017930 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 163 186 - -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 978 996 - -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 1 23 - -
Eupl04g01739 1146 Pfam Myb-like DNA-binding domain 593 636 IPR001005 -
Eupl04g01739 1146 Pfam Myb-like DNA-binding domain 540 585 IPR001005 -
Eupl04g01739 1146 Pfam Myb-like DNA-binding domain 487 531 IPR001005 -
Eupl04g01739 1146 SUPERFAMILY Homeodomain-like 536 632 IPR009057 -
Eupl04g01739 1146 SUPERFAMILY Homeodomain-like 465 537 IPR009057 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 689 718 - -
Eupl04g01739 1146 SUPERFAMILY Homeodomain-like 409 481 IPR009057 -
Eupl04g01739 1146 Gene3D - 593 639 - -
Eupl04g01739 1146 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 17 1015 - -
Eupl04g01739 1146 CDD SANT 593 636 IPR001005 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 39 63 - -
Eupl04g01739 1146 CDD SANT 489 532 IPR001005 -
Eupl04g01739 1146 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 486 532 IPR017930 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 873 895 - -
Eupl04g01739 1146 Gene3D - 430 480 - -
Eupl04g01739 1146 ProSiteProfiles Myb-like domain profile. 586 636 IPR001005 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 744 758 - -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 669 718 - -
Eupl04g01739 1146 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 428 484 IPR017930 -
Eupl04g01739 1146 MobiDBLite consensus disorder prediction 945 977 - -
Eupl04g01739 1146 SMART sant 332 429 IPR001005 -
Eupl04g01739 1146 SMART sant 485 534 IPR001005 -
Eupl04g01739 1146 SMART sant 432 482 IPR001005 -
Eupl04g01739 1146 SMART sant 538 587 IPR001005 -
Eupl04g01739 1146 SMART sant 590 638 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01739 Eupl-Chr4 33110015 33140103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01739 168 684 MYB-Related Transcription Factor Family AT3G18100 53.802 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl04g01739 Myb_DNA-binding 5.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01739 K09422 - nnu:104587774 1039.25