Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01732 ATGGTGGCGTTTGGCGGGAAGAGAGTGGGTCAGATAGTGGGTATTGGCGGGAACGGTGTGGGTCAGATTCTGGCAGCTGTAGCTGCAGCTCTCCTACTTCGCTTGTTCTCCGGCCCTGGCCCAGCATTACTACCGGAGAATGAGCAGGAGAACGAAGACAAACCCGCCGGAGAAGACGAAGAAACAGAATCTCCGGTTTCCGGGAAAGTTTTTCCGGTGACCATTCGGTGGAGCAACATCACATGCTCGCTCTCGGAAAAATCCGGGAAAACAGTGAAATTCCTTCTTAAAAATGTGAGTGGAGAGGCGAAACCAGGAAGATTACTCGCTATTATGGGACCGTCGGGATCGGGAAAAACAACGCTGCTCAATGTTCTCGCCGGGCAGCTCGCAGCGTCACCCCGATTACATCTTTCAGGCCTTCTGGAAGTCAATGGACGGCCGAGATCGAACAAAGCTTATAAGTTTGCTTATGTGAGACAGGAGGACCTTTTCTTCTCGCAGCTTACAGTGCGTGAAACACTGTCTCTTGCTGCCGAGCTTCAGCTCCCCGACATATCCTCGGTGGAAGAGAGAGACGAGTACGTCAGCAATCTTCTGTTTCGATTGGGCCTGGTCAGTTGTGCTGATTCCAATGTCGGAGATGCAAAAGTCCGTGGAATCAGTGGTGGGGAAAAGAAACGTCTGTCGCTTGCGTGTGAACTGATTGCGAGCCCATCTGTTATATTTGCAGATGAACCCACGACTGGGCTCGATGCATTTCAGGCAGAAAAGGTAATGGAGACACTCCGGCAACTTGCACAGGATGGACATACTGTAATTTGCTCCATACACCAGCCTAGAGGTTCGGTTTATGTGAAATTCGACGACATTGTTTTGCTGACCGAAGGTGCACTTGTTTATGCTGGTCCTGCGCATGAGGAGCCACTAGCATACTTCTCGAAATTTGGATATCGTTGCCCAGATCATGTGAATCCTGCTGAATTTTTGGCTGATCTCATATCCATTGACTATAGTTCCGCTGAAAGTGTCTACTCTTCTCAAAAGAGGATTGATGGTCTTGTTGAGGCATTCCCGCTGAACACATCAATTATTCTTTATGCAACTCCACTTTCCCGAATGGAAGGCTATAAGACGACCACAAAGTTTATCAGAAACTCTACTGTAAAGAGGAAAGGTGGTTGGTGGAGGCAGTTCTGGTTGCTCCTTAAACGGGCATGGATGCAGGCTTCTCGTGATGGACCTACGAACAAAGTTCGGGCAAGAATGTCTATTGCATCAGCTATAATATTTGGGTCGGTCTTCTGGCGAATGGGAAAATCGCAGACGTCTATACAGGACAGGATGGGATTACTTCAGGTTGCTGCAATAAACACGGCAATGGCTGCACTTACAAAGACTGTGGGTGTGTTTCCAAAGGAGCGTGCAATTGTAGATAGAGAGCGTGCCAAGGGATCTTATGCATTAGGGCCATATTTACTTTCTAAATTGTTGGCTGAGATCCCTGTTGGTGCAGCATTTCCTCTAATATTTGGTATAATTTTGTATCCCATGGCTGGTCTTCATCCTACTCTATCCAGATTTGGAAGGTTCTGTGGAATCGTGACAGTGGAGTCATTTGCCGCATCTGCAATGGGTCTAACTGTCGGAGCTATGGCTCCGACCACTGAAGCAGCTATGGCCTTGGGACCATCTCTTATGACGGTTTTCCTTGTATTCGGTGGCTATTATGTCAATTCGGAAAACACACCGGTGATCTTTCGTTGGATTCCTCGAGTTTCTCTCATAAGATGGGCATTTCAAGGGCTTTGCATAAACGAATTTAGTGCTCTACAATTTGATCATCAGCATTCCTTTGATATTCAAACTGGAGAACAGGTGCTTGAGAGGCTCTCCTTTGGAGGGAGTCGCGTTAGGGATACAGTGATGGCACAAGGTCGAATACTGTTGTTTTGGTATTGGACTACTTACCTTCTCCTCAAGAAAAACAAGCCCAAATACCAGCAGCTTGAACATCCTCCCCTTGACCAACTCCAACAGCATGAGCAGCTTGATCCTCCTGGTGGCCAACCTGAACAGTCTCAGCAGCTTGATCCTCCTCCGCTTGACGAAGTTGAACCCTCCCAGCAGGTAGAGTCTCCTCTCCTTGACCAACTTCAACCGTTTATCATAGAAGGCTTGTAA 2184 0.4785 MVAFGGKRVGQIVGIGGNGVGQILAAVAAALLLRLFSGPGPALLPENEQENEDKPAGEDEETESPVSGKVFPVTIRWSNITCSLSEKSGKTVKFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGLLEVNGRPRSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPDISSVEERDEYVSNLLFRLGLVSCADSNVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAFQAEKVMETLRQLAQDGHTVICSIHQPRGSVYVKFDDIVLLTEGALVYAGPAHEEPLAYFSKFGYRCPDHVNPAEFLADLISIDYSSAESVYSSQKRIDGLVEAFPLNTSIILYATPLSRMEGYKTTTKFIRNSTVKRKGGWWRQFWLLLKRAWMQASRDGPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYALGPYLLSKLLAEIPVGAAFPLIFGIILYPMAGLHPTLSRFGRFCGIVTVESFAASAMGLTVGAMAPTTEAAMALGPSLMTVFLVFGGYYVNSENTPVIFRWIPRVSLIRWAFQGLCINEFSALQFDHQHSFDIQTGEQVLERLSFGGSRVRDTVMAQGRILLFWYWTTYLLLKKNKPKYQQLEHPPLDQLQQHEQLDPPGGQPEQSQQLDPPPLDEVEPSQQVESPLLDQLQPFIIEGL* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01732 727 Pfam ABC-2 type transporter 278 335 IPR043926 GO:0140359
Eupl04g01732 727 Pfam ABC transporter 96 248 IPR003439 GO:0005524
Eupl04g01732 727 Gene3D - 74 312 IPR027417 -
Eupl04g01732 727 MobiDBLite consensus disorder prediction 42 66 - -
Eupl04g01732 727 ProSitePatterns ABC transporters family signature. 221 235 IPR017871 GO:0005524|GO:0016887
Eupl04g01732 727 MobiDBLite consensus disorder prediction 677 715 - -
Eupl04g01732 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 307 IPR027417 -
Eupl04g01732 727 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 321 IPR003439 GO:0005524
Eupl04g01732 727 MobiDBLite consensus disorder prediction 683 697 - -
Eupl04g01732 727 CDD ABCG_EPDR 72 303 - -
Eupl04g01732 727 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 57 615 - -
Eupl04g01732 727 FunFam ABC transporter G family member 7 73 311 - -
Eupl04g01732 727 SMART AAA_5 105 298 IPR003593 GO:0016887
Eupl04g01732 727 Pfam ABC-2 type transporter 397 608 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01732 Eupl-Chr4 33024818 33037227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01732 95 315 Calmodulin-binding Proteins AT2G36910 28.444 3.37e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01732 K05681 - nnu:104587769 1211.05