Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01679 ATGCCCCATTGTGGAGAGACTGACCAATTCTCTAATGATGCACGGGCACAACTGCGGGAAGAAGCTGATGGCTGTATGTTTATCAAGCACGCCTTGGACATCATGCATTTCCTTATAGATGCTAACCCCATTCAAATTATTATAGATGCTGTGATCAACAATGAACCAAGTGAAGATACTACTCTAATTGGTTTAGCTGATGTTTTGAGGAGTCAGGCCGTTGATATCTCTCCTTTTTGGGGTGCCAACCAGGCAATGTATCTTATTATTACGGGTTCTCGTGAAAGTGCTTTCAAGAATATCAAGACTTTAGCCGAGTGCCTATCAAATGAGCTCATCAATTCTACCAAAGTTTCTTCCAATAGTTATGCCATTAAGAAAAAAGACGAGATTGAGCGAGTTGCCAGGGCCAACCATTGA 420 0.419 MPHCGETDQFSNDARAQLREEADGCMFIKHALDIMHFLIDANPIQIIIDAVINNEPSEDTTLIGLADVLRSQAVDISPFWGANQAMYLIITGSRESAFKNIKTLAECLSNELINSTKVSSNSYAIKKKDEIERVARANH* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01679 139 PANTHER RIBOSOMAL PROTEIN S7 28 138 IPR000235 GO:0006412
Eupl04g01679 139 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 26 139 IPR000235 GO:0006412
Eupl04g01679 139 Gene3D Ribosomal protein S7 domain 20 139 IPR036823 -
Eupl04g01679 139 Pfam Ribosomal protein S7p/S5e 28 138 IPR023798 -
Eupl04g01679 139 SUPERFAMILY Ribosomal protein S7 28 138 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01679 Eupl-Chr4 31324707 31325299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01679 3 139 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 56.429 1.84e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01679 K02989 - psom:113282965 161.384