Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01670 ATGAAGTTCAACCCAAGGGTGTCGAGCTCCAGGCGCAAGTGCCGGAAGGCGCACTTCACCGCTCCGTCTAGCGTGCGCCGGGTGCTGATGAGCGCCCCGCTCTCAACCGACCTTCGGAACAAGTACAACGTTCGGTCGGTGCCGGTGAGGAAGGACGACGAGGTGCAGGTGGTGCGTGGAACCTACAAAGGCAGAGAAGGCAAGGTTGTCCAGGTGTACCGTCGCAAATGGGTCATACATGTGGAGCGCATCACACGGGAGAAGGTTAACGGCTCCACCGTCAACGTTGGCGTCAACCCCTCCAAAGTCATCATCACCAAGCTCAAGCTCGACAAGGACCGCAAGTCCCTCCTCGATCGCAAGGCCAAGGGCCGTTCCGCAAACAAGGCCAAGGGCAAGTTCACCGCGGAAGATGTCGCAGCTGCCGCTGCTGGACCGTCACTTCAGGAGGTCGATTAG 459 0.5969 MKFNPRVSSSRRKCRKAHFTAPSSVRRVLMSAPLSTDLRNKYNVRSVPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHVERITREKVNGSTVNVGVNPSKVIITKLKLDKDRKSLLDRKAKGRSANKAKGKFTAEDVAAAAAGPSLQEVD* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01670 152 CDD KOW_RPL26 52 105 IPR041988 GO:0003723
Eupl04g01670 152 MobiDBLite consensus disorder prediction 119 152 - -
Eupl04g01670 152 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Eupl04g01670 152 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 140 IPR005756 GO:0003735|GO:0006412|GO:0015934
Eupl04g01670 152 Pfam KOW motif 51 82 IPR005824 -
Eupl04g01670 152 FunFam 60S ribosomal protein L26 1 142 - -
Eupl04g01670 152 SUPERFAMILY Translation proteins SH3-like domain 8 125 IPR008991 -
Eupl04g01670 152 NCBIfam 50S ribosomal protein L24 8 122 IPR005756 GO:0003735|GO:0006412|GO:0015934
Eupl04g01670 152 ProSitePatterns Ribosomal protein L24 signature. 52 69 IPR005825 GO:0003735|GO:0005840|GO:0006412
Eupl04g01670 152 SMART kow_9 48 75 IPR005824 -
Eupl04g01670 152 Gene3D - 1 143 IPR014722 -
Eupl04g01670 152 Hamap 50S ribosomal protein L24 [rplX]. 9 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01670 Eupl-Chr4 31039584 31040570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01670 1 139 Cytoplasmic Ribosomal Protein Gene Family AT5G67510 85.106 3.46e-83 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01670 K02898 - nnu:104613310 274.633