Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01667 ATGGAACCGCCACTCTCCGCCGCCACAACCACCACCCAGCTCGGGTACGCCGATTCAGTCGGCTCGTCCCCCCGGTCCCGCAACACCGATACCTGGGACGAACCCATCCCATCCGTCCCGGGCGCTAGACTGCGCTTGATGTGCAGCTATGATGGCCGAATCGTCCCCCGCCCCCACGACAAGTCCCTCTGCTACCTTGGTGGCGACACCCGCATCGTCGTCGTGGACCGAAACTCCTCTCTTGCTGACCTTTCCCTCCGCCTCTCCCGCAGCCTCCTCAACGGCCGCTCTTTCACCCTCAAATACCAACTCCCCAACGAAGACCTCGACTCCCTCATCTCCGTCACCACCGACGAAGATCTCGAAAACATGATCGAAGAGTACGATCGCAATTCTTCTTCTTCTTCTCTCAAGCCCTCTCGTCTCCGATTGTTTCTCTTCCCCTCGAAGCCCGATTCAGCCTCGTCGATTGGATCGCTTCTCGACTCCTCCAAATCGGAGACTTGGTTCGTCGATGCCCTCAACGGTTCTGGAGTATTGCCTAGAGGCTCTAACGACTCCGATTCCGTTAATTGCTTACTGGGTCTTGATGATGTGGTTCCAGTCGACCCTTCTGCAGAGGTTGAACCGCAAAATGATTCTTTGAGGAATAACCACAAACACGTCAAGCATGGGCAGGATGTTCATTCGGTGCCCGATTCGCCGATGTTGGAGACTACTTCGTCATTTGGGTCTACTTCTCCGTCGTCTCCCATGTCCAATTTGCCTCCAATTCGTGTTCATGTTGAGGGTGCTGGTGGGATTCGATTGCAGGATCAAAAGCTAGGGTTAGAGGATCATTTTTCACAGATGAATCTCGGCGCTGCTGCTGTGGCGCAGAAGCAAGACGAGGGTTTCGCTGTTCTGTCGTCTCCTCCTCCTCTTCCAACTACAATTACAACTGCAACAATGGCACCGGCTGTGACAATCAATTCTACTACTGTCCTTGGTGAAAACCCGAATTGGGTTTTCTCCGATGATGAGAGATCAGAACAGGGGGTCGCGGTCGGGTTTCGGAGACAGCCACAGCCTCCACCACCGCAATTGCAGCAGAAAACTAGTGGCGGAAATGATTCATCATCACCAGATGGAATCACAAGAGATAATAGTATTTCAAATGCGATTTCTCGAGCAAAACCTGTATTTTATCAAGAACCAGTTGCTCCAGTTGCTTCCAGAGACAACAGGGTTTCTGCTAACCCTGTTGATCCGCGGTTTATCTCCGATCCCAACTATCGGATTATGATGCAACAACAAGTTCAGGATTCTGGGTATGTGCTACATCAACAATTGGATCAACAGCAGCAGCAACTGCAACTGCAACAGCAACAGCAACAGCAACAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACACCACCAATTCATTCAGGCTGGCACACATTACATCCACCAGCAGGCCACAGGACCGCCAATCTCTTCTTACTACCCAATGTATGTGCAGCAACATCATCATCAACTCGATCAGCACGACGGGGCGTACTTCCTGCCAGTTAGGCAGAACCAACCTTACAACCTGCCTATGCAAGCCAATTTGATTGACACTTCTTCTATCCCTCCAAATCGACCTCAAACACCTCCAAATCCTACCATGATGCATACTCCTGCAGCCTACAAAGAATCTTCAGCACCCGTCTTCGCAAGGTCTGCTCCTCCGCCTAAACCTGAATCGGCCGCAACAATGTTTAGAACAGCTGCTGCAGCAGCTCCACCGCTGGTCAATATGGCTTCGGATCCACACCAGCAGCAATACATGGGATACCAAATGCATCACCCACCTCAGTCTGTTGCTGCTACTGCTAATTATGTTTATGAATACCCTGATCCTACACGTGCACAGATATACTACACTCAGCCCCTGGCAGCCTCATTGCCTCCCCAATACCAAACGATGAGCTCGGCTGCAACGGTGGTGGCATCGGAGGCTTCAGCACAGCTGCCCACAGACAACAGTAAGCAGCAGCACATCAGAACCTCATAA 2061 0.5133 MEPPLSAATTTTQLGYADSVGSSPRSRNTDTWDEPIPSVPGARLRLMCSYDGRIVPRPHDKSLCYLGGDTRIVVVDRNSSLADLSLRLSRSLLNGRSFTLKYQLPNEDLDSLISVTTDEDLENMIEEYDRNSSSSSLKPSRLRLFLFPSKPDSASSIGSLLDSSKSETWFVDALNGSGVLPRGSNDSDSVNCLLGLDDVVPVDPSAEVEPQNDSLRNNHKHVKHGQDVHSVPDSPMLETTSSFGSTSPSSPMSNLPPIRVHVEGAGGIRLQDQKLGLEDHFSQMNLGAAAVAQKQDEGFAVLSSPPPLPTTITTATMAPAVTINSTTVLGENPNWVFSDDERSEQGVAVGFRRQPQPPPPQLQQKTSGGNDSSSPDGITRDNSISNAISRAKPVFYQEPVAPVASRDNRVSANPVDPRFISDPNYRIMMQQQVQDSGYVLHQQLDQQQQQLQLQQQQQQQQQQQQQQQQQQQQQQQQQHHQFIQAGTHYIHQQATGPPISSYYPMYVQQHHHQLDQHDGAYFLPVRQNQPYNLPMQANLIDTSSIPPNRPQTPPNPTMMHTPAAYKESSAPVFARSAPPPKPESAATMFRTAAAAAPPLVNMASDPHQQQYMGYQMHHPPQSVAATANYVYEYPDPTRAQIYYTQPLAASLPPQYQTMSSAATVVASEASAQLPTDNSKQQHIRTS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01667 686 MobiDBLite consensus disorder prediction 350 383 - -
Eupl04g01667 686 PANTHER OS05G0427100 PROTEIN-RELATED 16 491 - -
Eupl04g01667 686 CDD PB1_UP2 47 147 - -
Eupl04g01667 686 MobiDBLite consensus disorder prediction 203 255 - -
Eupl04g01667 686 SMART PB1_new 58 149 IPR000270 GO:0005515
Eupl04g01667 686 SUPERFAMILY CAD & PB1 domains 59 157 - -
Eupl04g01667 686 MobiDBLite consensus disorder prediction 233 254 - -
Eupl04g01667 686 Pfam PB1 domain 59 148 IPR000270 GO:0005515
Eupl04g01667 686 MobiDBLite consensus disorder prediction 667 686 - -
Eupl04g01667 686 MobiDBLite consensus disorder prediction 363 383 - -
Eupl04g01667 686 Coils Coil 441 478 - -
Eupl04g01667 686 MobiDBLite consensus disorder prediction 1 36 - -
Eupl04g01667 686 MobiDBLite consensus disorder prediction 1 33 - -
Eupl04g01667 686 MobiDBLite consensus disorder prediction 213 228 - -
Eupl04g01667 686 ProSiteProfiles PB1 domain profile. 43 149 IPR000270 GO:0005515
Eupl04g01667 686 Gene3D - 63 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01667 Eupl-Chr4 30887989 30890877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01667 43 175 MAP Kinase Kinase Kinase AT5G57610 45.185 6.45e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01667 - - nnu:104613306 748.429