Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01663 ATGGCTGCTGTTGAAGAGAACCCAACAGCAGCAGAAGCAGAAGAACAGATTAGTTTAAGCAGACCCAGAAACCAACCAATCTCACCTTCAAATCCAACCCCACAAATCTCTCCTCTCAATCAATCCACTCGCTGTAAACCCACTATTTCTTCTCTGTTTCTCTCTGCTTTCACCACAAATAATAACAACAATAGTTCCAATATGGGTTCCAACGTGTTTCCATCATTGAAGAATAAGACGAAGAACTTCACCTCTGCAACATTTAGAGGTCTCGGATGCGCGAAGTCTTCGCAGGTATTGGCACCGGAAGCTATTCGGTCTTCGGCAGATTGGGAAGCTAAGAAAGTGAGGAAAAAGAAGCAGAGGAGCTCAAACAGGAAGAAGAATCACCAAACGATGACAACGACGAACAACCCATCTCCTGTTGTTGTTGTTGTTCCTGATGTTTGGTGCGCTCCCGGGATCGCTCTCTCTTCCGATGCCACCTCTGTCGATTGTGTTGTATCCAGGAGGCCGGTTCCGGGGAGGGGGAGGGTTGATGGAGAGAGGATGAATCACAGAGAGCGCTCTTGTACTTTAACGCGGACAGTTGACCTTGAACACATATCTGTTCTGGATTTCCCATCTGCCTTTGAAGCAACACACTCTCGACCTGATATATTCAGCAGTAGGCATCATCGTCATTTTCGACATCGTTCTCCTGGAGGGGTTGCGGAGATCATGGTGTTCCAAAGTAGCCTGATGTTGGGAGAAAGATCAGATGGATACGATCGATACAGGGATTGGCGGCTCAATGTTGATAATATGTCCTATGAGGAATTACTTGAGCTGGGTGATCGAATTGGGTATGTGAGCACCGGGTTGAGAGAAGATGAGATATTCAGCTGCGTCAGGAAAACTAAGCACTCAATTTTGGGTCATCTGCCATCGCATTTCCCAACTGAAACAGAGAGGAAATGCAGCATTTGTCAAGAAGAGTATGAAACAGATGATGAGGTGGGGAAGTTGGATTGCGGCCACAGCTACCACATATGTTGTATTAAGCAGTGGCTTCTGCGGAAGAATGCTTGCCCCGTCTGCAAGGCTGCTGCAGCTGCTCAATACTAA 1107 0.4697 MAAVEENPTAAEAEEQISLSRPRNQPISPSNPTPQISPLNQSTRCKPTISSLFLSAFTTNNNNNSSNMGSNVFPSLKNKTKNFTSATFRGLGCAKSSQVLAPEAIRSSADWEAKKVRKKKQRSSNRKKNHQTMTTTNNPSPVVVVVPDVWCAPGIALSSDATSVDCVVSRRPVPGRGRVDGERMNHRERSCTLTRTVDLEHISVLDFPSAFEATHSRPDIFSSRHHRHFRHRSPGGVAEIMVFQSSLMLGERSDGYDRYRDWRLNVDNMSYEELLELGDRIGYVSTGLREDEIFSCVRKTKHSILGHLPSHFPTETERKCSICQEEYETDDEVGKLDCGHSYHICCIKQWLLRKNACPVCKAAAAAQY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01663 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 367 IPR013083 -
Eupl04g01663 368 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 18 365 IPR045191 GO:0061630
Eupl04g01663 368 MobiDBLite consensus disorder prediction 109 139 - -
Eupl04g01663 368 MobiDBLite consensus disorder prediction 1 43 - -
Eupl04g01663 368 Pfam Ring finger domain 319 361 IPR001841 -
Eupl04g01663 368 SUPERFAMILY RING/U-box 310 363 - -
Eupl04g01663 368 ProSiteProfiles Zinc finger RING-type profile. 320 361 IPR001841 -
Eupl04g01663 368 SMART ring_2 320 360 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01663 Eupl-Chr4 30743020 30752416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01663 15 272 C3H Transcription Factor Family AT1G73760 34.629 1.07e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01663 - - ming:122078408 469.159