Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01652 ATGAGTGGAGAATCAAAAGGCCCAAGCACCAGAGATCTTCTCTGCAACGCCGGTGCTGGTGCAGCAGCAGGGGCTATTGCCGCCACTTTCGTGTGCCCATTGGATGTGATCAAGACAAGACTTCAGGTACATGGGCTGCCTGAAGTGTCTCATTCTGGTCACGGAGGTAGTATCATTATTGCAAGCCTGCAAAACATAATAAAAAATGAGGGTGTAAGGGGAATGTATCGTGGCCTTTCTCCAACAATATTGGCGCTACTTCCAACCTGGGCAGTTTACTTCACAGTTTATGAGAAACTCAAAGGCCTACTTCATTCACATGTGGATGGGGAATACCAACTTACAATTGGTGCAAATATGATAGCTGCTTCAGGTGCTGGAGCAGCAACGGCCATTGCAACCAATCCATTGTGGGTTGTTAAGACCAGACTTCAAACACAGGGAATGAGGTCAGGAGTGGTTCCTTACAGCAGTGTATTTTCCGCTTTGAGAAGGATCGCCCACGAAGAGGGAATCCGAGGATTGTATAGTGGCCTTTTGCCTTCATTAGCTGGGGTATGCCATGTCGCCATTCAGTTTCCAGTGTATGAAAAGATCAAGTCCTACTTAGCAAGAAGAGATGATACAACCGTCGATAACCTCAGTGTTGGACATCTCGCTGTTGCTTCTTCAGTATCTAAAATACTTGCCTCCACCGTGACGTATCCACACGAGGTTGTGCGGTCAAGGCTGCAAGAGCAAGGACAAGCTCGCAATTCTGAGATACATTACGCAGGTGTTATGGACTGCGTTAAGAAGATCTTCCACAAGGAAGGTGTCACCGGTTTTTACCGTGGCTGTGCCACGAATCTGTTGAGAACGACCCCAGCTGCTGTTATAACACTTACCAGTTTTGATAAGATTCAAAGGTTTTTGCGGCATGTTTTACCTCCTGAGTAG 939 0.4696 MSGESKGPSTRDLLCNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPEVSHSGHGGSIIIASLQNIIKNEGVRGMYRGLSPTILALLPTWAVYFTVYEKLKGLLHSHVDGEYQLTIGANMIAASGAGAATAIATNPLWVVKTRLQTQGMRSGVVPYSSVFSALRRIAHEEGIRGLYSGLLPSLAGVCHVAIQFPVYEKIKSYLARRDDTTVDNLSVGHLAVASSVSKILASTVTYPHEVVRSRLQEQGQARNSEIHYAGVMDCVKKIFHKEGVTGFYRGCATNLLRTTPAAVITLTSFDKIQRFLRHVLPPE* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01652 312 Pfam Mitochondrial carrier protein 114 205 IPR018108 -
Eupl04g01652 312 Pfam Mitochondrial carrier protein 15 106 IPR018108 -
Eupl04g01652 312 Pfam Mitochondrial carrier protein 215 306 IPR018108 -
Eupl04g01652 312 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Eupl04g01652 312 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Eupl04g01652 312 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Eupl04g01652 312 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Eupl04g01652 312 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Eupl04g01652 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Eupl04g01652 312 SUPERFAMILY Mitochondrial carrier 11 300 IPR023395 -
Eupl04g01652 312 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
Eupl04g01652 312 Gene3D Mitochondrial carrier domain 3 305 IPR023395 -
Eupl04g01652 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 13 309 IPR044712 GO:0006862|GO:0055085
Eupl04g01652 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 304 IPR018108 -
Eupl04g01652 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Eupl04g01652 312 FunFam NAD+ transporter 111 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01652 Eupl-Chr4 30376274 30390876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01652 29 312 Chloroplast and Mitochondria Gene Families AT1G25380 70.070 3.24e-145 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01652 K15115 - nnu:104613282 506.523