Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01650 ATGGCGTCGGGTGGAGGTAGGCGTCGTCATCATCATAATCTTGTTCCTCTTGCTGCCTTGATCAGCAGAGAGATGAGGAGTGAGAAGATGGAGAAGCCGAGTGTGCGATATGGTTATGCTGCACAGTCTAGGAAGGGTGAGGACTATTTCCTGATGAAGACAGATTGTCAGAGTGTTCCAGGGAATTCTTCATCTACGTTTTCTGCATTTGCAATCTTTGATGGGCACAATGGGAATGCTGCTGCAATTTTTACCAGGGAAAACTTGTTAAATCATGTATTGGGTGCAATTCCCCGTGGGCTTGGGCGGGAGGAGTGGCTTCAAGCTTTACCTCGGGCATTAGTTGCTGGATTTGTGAAGACTGACAAGGAATTCCAGAGCAGAGGTGAAACTTCTGGAACCACTGTTACGTTTGTAATAGTTGATGGATGGACTGTCACAGTTGCATCAGTTGGAGACTCACGTTGCATTTTGGATGCTCAGGGTGGTGCTATTTCCAGCTTGACTGTTGATCATAGACTAGAAGAAAATGTGGAGGAAAGGGAACGTGTGACTGCTAGTGGAGGTGAAGTTGGGAGGCTCAGCATTTTTGGTGGTACTGAGATTGGTCCCCTCCGTTGCTGGCCAGGGGGTTTATGCCTTTCAAGGTCAATTGGAGACATGGATGTTGGGGAATTTATAGTTCCAATACCATATGTTAAACAAGTGAAGCTATCAAACGTGGGGGGAAGGCTTATAATAGCTTCTGATGGCATATGGGATGCATTATCCTCTGAGATGGCCGCAAAATCTTGCCGTGGGTTGCCTGCAGAGCTTGCTGCTAAGCAAGTAGTGAAGGAAGCATTGAGGACAAGGGGGCTCAAGGATGACACGACCTGCATTGTTGTTGACATAATCCCTCCTGATAATTCAGTACCGCCGTCTCCCCCTCCAAAAAAGCAAAACAGGCTTAGCTCTCTTATCTTCAGGAAGAGGTCCCGTGATTCTGCAAATAAACTAGCAAAGAAGCTATCAGCTGTTGGTATAGTAGAAGAGCTATTCGAAGAAGGCTCGGCAATGCTTGCAGAAAGACTGGGAAATGACTCATCAGCAGGGCAGTCCACATCTGGTCTTTTCACTTGTGCTGTTTGCCAAGTGGACCTCGCCCCAAGCGAGGGTATCTCTGTTCATGCTGGTTCCATTTTCTCCACCAGTTCAAAGCCTTGGCAAGGTCCCTTCCTTTGTATTGATTGTCGTAATAAGAAGGACGCGATGGAAGGAAAGCGACCTAGTGGAGTTAAAGTGGTATAA 1290 0.4713 MASGGGRRRHHHNLVPLAALISREMRSEKMEKPSVRYGYAAQSRKGEDYFLMKTDCQSVPGNSSSTFSAFAIFDGHNGNAAAIFTRENLLNHVLGAIPRGLGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTVTFVIVDGWTVTVASVGDSRCILDAQGGAISSLTVDHRLEENVEERERVTASGGEVGRLSIFGGTEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNVGGRLIIASDGIWDALSSEMAAKSCRGLPAELAAKQVVKEALRTRGLKDDTTCIVVDIIPPDNSVPPSPPPKKQNRLSSLIFRKRSRDSANKLAKKLSAVGIVEELFEEGSAMLAERLGNDSSAGQSTSGLFTCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCIDCRNKKDAMEGKRPSGVKVV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01650 429 SMART PP2C_SIG_2 52 298 IPR001932 -
Eupl04g01650 429 SMART PP2C_4 26 296 IPR001932 -
Eupl04g01650 429 ProSiteProfiles PPM-type phosphatase domain profile. 29 298 IPR001932 -
Eupl04g01650 429 PANTHER PROTEIN PHOSPHATASE 31 297 IPR015655 GO:0004722|GO:0006470
Eupl04g01650 429 FunFam probable protein phosphatase 2C 5 36 303 - -
Eupl04g01650 429 Pfam Protein phosphatase 2C 62 283 IPR001932 -
Eupl04g01650 429 CDD PP2Cc 37 298 IPR001932 -
Eupl04g01650 429 Gene3D - 35 302 IPR036457 -
Eupl04g01650 429 SUPERFAMILY PP2C-like 26 298 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01650 Eupl-Chr4 30341074 30347264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01650 1 429 PP2C-type Phosphatase Gene Family AT1G68410 78.947 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01650 - - ming:122065685 755.362