Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01645 ATGGGGAATCTGCCATGGCAAGTGGATGATGCTAGCTTAGAGCAGGTGTTCAGTGAACATGGTAAGGTGGTGGATGCCAGGGTTGTTTATGACCGGGAGACTGGACGTTCACGCGGGTTTGGCTTTGTAACGATGTCCACACAGACCGAGTTGGATGATGCCATCGCTGCTCTTGACGGATAG 183 0.5246 MGNLPWQVDDASLEQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDG* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01645 60 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 60 IPR000504 GO:0003723
Eupl04g01645 60 PANTHER OS02G0815200 PROTEIN 2 60 - -
Eupl04g01645 60 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1 60 IPR000504 GO:0003723
Eupl04g01645 60 SUPERFAMILY RNA-binding domain, RBD 2 60 IPR035979 GO:0003676
Eupl04g01645 60 Gene3D - 1 60 IPR012677 -
Eupl04g01645 60 SMART rrm1_1 1 60 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01645 Eupl-Chr4 30044238 30044744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01645 1 60 Eukaryotic Initiation Factors Gene Family AT1G22760 40.000 1.73e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01645 - - msin:131239823 117.087