Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01635 ATGGGGTCGAAGATTGAAGGTACTTCGGCGCCTGTTGTCCGTCGAGACCCTTATGAGGTGTTGAGCGTATCAAGGGATTCGTCCGATCAGGAGATTAAGACAGCGTACAGAAAGCTTGCTCTCAAGTATCATCCTGATAAAAATGCCAGCAATCCTGAAGCTTCAGAACTCTTCAAAGAAGTTGCATATTCTTATAATATCTTATCAGATCCAGAGAAAAGAAGGCAGTATGATAGTGCGGGATTTGAGGCTCTTGAAGGTGATGGCATGGATATGGAAATTGACTTATCCAACCTGGGAACTGTCAATACAATGTTTGCAGCATTATTCAGCAAGCTGGGTGTCCCTATCAAGACGACAATTTCTGCTAATGTTCTTGAAGAAGCTCTGAATGGAACTGTTACAGTTAGACCTCTTCCTATTGGAACATCAGTTAGCGGAAAGGTAGACAAGCAATGTGCCCACTTTTTTGGTGTAACAATCCATGAGCAGCAAGCCCAGGCAGGGGTTGTAGTTAGAGTTACTTCAGCTGCACAAAGCAAATTTAAGCTACTTTATTTTGAACAAGATGCCAATGGAGGTTATGGGTTGGCTTTACAGGAAGACAGTGAGAAGACTGGCAAGGTAACGTCTGCAGGGATGTATTTCTTACATTTTCAAGTATACCGCATGGATTCAACTGTGAATGCGCTAGCAATGGCTAAGGACCCTGAAGCCGTTTTCTTCAAAAGGTTGGAAGGTCTCCAGCCTTGTGAAGTTTCAGAACTAAAAGCTGGGACTCACATATTCGCTGTTTATGGAGATAACTTTTTTAAGACTGCTACCTATACCATTGAGGCTCTTTGTGCAAAGTCATTTGAGGATACTACTGAGAAGCTTAAGGAGATTGAGGCTCAAATTTTAAGGAAGAGAAATGAGCTTAGACAATTTGAGATAGCATATAGAAAGGCATTGGCACACTTCCAGGAAGTCTCAAACAGATACAGCCAAGAAAAGCAATCTGTTGATGAACTGCTACAACAGAGGGATAGCATCCATTCTTCATTCACTGTAGCTAGGACGGCCAATAACGCTAGTGGTAGTAGTAGCAGCAAAGTTCCCAGTGAGGAGTTTAAGGCTGAGAGTCCGGGAGAGGATGGATGTTCAGATGGGAAGGATAAATCAAGCAAGAAAAAATGGTTTAATTTCAATCCGAAAGGATCAGATAAAAAGCTTGGTTGA 1221 0.4234 MGSKIEGTSAPVVRRDPYEVLSVSRDSSDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALEGDGMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVDKQCAHFFGVTIHEQQAQAGVVVRVTSAAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAVFFKRLEGLQPCEVSELKAGTHIFAVYGDNFFKTATYTIEALCAKSFEDTTEKLKEIEAQILRKRNELRQFEIAYRKALAHFQEVSNRYSQEKQSVDELLQQRDSIHSSFTVARTANNASGSSSSKVPSEEFKAESPGEDGCSDGKDKSSKKKWFNFNPKGSDKKLG* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01635 406 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Eupl04g01635 406 MobiDBLite consensus disorder prediction 355 406 - -
Eupl04g01635 406 MobiDBLite consensus disorder prediction 355 369 - -
Eupl04g01635 406 PRINTS DnaJ domain signature 18 36 IPR001623 -
Eupl04g01635 406 PRINTS DnaJ domain signature 73 92 IPR001623 -
Eupl04g01635 406 PRINTS DnaJ domain signature 36 51 IPR001623 -
Eupl04g01635 406 PRINTS DnaJ domain signature 53 73 IPR001623 -
Eupl04g01635 406 Coils Coil 286 313 - -
Eupl04g01635 406 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 10 404 - -
Eupl04g01635 406 Gene3D DnaJ domain 5 95 IPR036869 -
Eupl04g01635 406 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Eupl04g01635 406 CDD DnaJ 16 70 IPR001623 -
Eupl04g01635 406 MobiDBLite consensus disorder prediction 371 406 - -
Eupl04g01635 406 Pfam DnaJ domain 16 78 IPR001623 -
Eupl04g01635 406 FunFam Chaperone protein dnaJ 16 2 98 - -
Eupl04g01635 406 Coils Coil 321 341 - -
Eupl04g01635 406 SMART dnaj_3 15 73 IPR001623 -
Eupl04g01635 406 SUPERFAMILY Chaperone J-domain 15 97 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01635 Eupl-Chr4 29701477 29761421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01635 7 79 C2H2 Transcription Factor Family AT1G74250 43.590 1.69e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01635 - - vvi:100252578 691.419