Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01624 ATGTATACCGCGAGGAGGAAAATCCAGAAAGATAAGGATGCTGAACCAACTGAGTTTGAGGAGACAGTTGCGCAGTCATTTTTTGATTTGGAGAATACCAATCAGGAGCTCAAAAGTGACTTGAAGGATCTTTACATAAATTCAGCAGTTCAAATTGATGTTTCTGGGAACCGAAAGGCGGTTGTGATTCATGTTCCATACAGGCTGAGGAAAGCATTTCGCAAAATTCATGTGAGGCTTGTGAGGGAGCTGGAGAAGAAGTTCAGCGGGAAGGATGTGATCATGATCGCCACCCGAAGGATAGTGAGGCCACCAAAGAAAGGCTCTGCTGCTCAACGGCCCCGCAGCCGGACTCTCACGGCTGTGCACGATGCCATGCTGGAGGATGTTGTGTATCCCGCTGAGATTGTTGGGAAGCGCATCAGATACAGGATTGATGGCTCCAAAATTATTAAGATTTTCCTGGACCCTAAGGAACGGAACAACACTGAATACAAGCTCGAGACATTTGCTGGAGTTTACAGGAAACTTTCTGGAAAGGATGTTGTATTCGAGTTCCCAATGACGGAAGCATAA 576 0.4635 MYTARRKIQKDKDAEPTEFEETVAQSFFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVIMIATRRIVRPPKKGSAAQRPRSRTLTAVHDAMLEDVVYPAEIVGKRIRYRIDGSKIIKIFLDPKERNNTEYKLETFAGVYRKLSGKDVVFEFPMTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01624 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Eupl04g01624 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Eupl04g01624 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01624 Eupl-Chr4 29508885 29512949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01624 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 77.487 1.21e-113 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01624 K02993 - nnu:104602332 359.377