Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g01611 ATGAGACTTTCCTTCTCTAGTAGCTATTGCAGTAGGTTTCAATCTCTCGGCCTCCTACAGTCGATCAGACCATGGTGGTCCCGGATGGAGTCCACCACCCGTCGATGTCGTCGAAAGGACAAGATCATCGTCATCATGGGCGCCACGGGTACGGGTAAATCCCGTCTCTCCATCGACCTTGCCACTCGCTACTTTCCCTCCGAGATCATCAACTCAGACAAAATACAAGTCTACCGTGGCCTCGACATTACCACTAACAAGATCCCAATGCACGAACGACTTGGCGTTCCCCACCATCTTCTTGGCGACTTCGACCCTGCCGATGGGGAGCTATCCCCTTCCGAGTTCCGTTCACATGCCGACTCAACTGTGGCAGCAATATCTGCTCGCCGTCGCTTACCCCTCATCGTTGGTGGGTCCAATTCGTTCATCCACGCTCTCGTCTCGGGTTCCAATTCAGACGGCTTAGATTCCGTCTCGGCTGAATTACGATACGATTGTTGTTTTCTCTGGGTGGACGTGTCCTTATCCATCCTTTATGAGTACCTCTTACGCCGCGTCGACGACATGTTCGACACTGGGATGTTTCAAGAGTTGGCCAGGTTTTATAACCCGGATACTGACTCAGAATTAGCTCCTCGAGTTGGGATAAGGAAGGCAATCGGTGTTCCAGAGTTCAACCGGTATTTTCGTTGTTTTCCTCCGAGGGGTGGTGGTGTAGGAGATGGAGGAGGAGGAGGTGGGGGCGGAAGTGGAGGTGGTATTGTGATGGACACGCATATCGAGGGGAATCTGGCAAGACGCTTGCTTTTCGAGGAGGCAGTGGAGGCTATTAAGGATAATACGTGTCAATTAGCAAAGCGACAGATAGGAAAGATCCTTCGGTTAAGATCAGCCGGGTGGGATTTACGGCGGTTAAATGCGACGGATGCGTTTCGAGCGGTATTGGCGTCAGATTCCGGCCGGTCGTCAGAAATTTGGGAGAAGGAAGTGGTGGAGCCAAGCGTGAAGATTGTGAAGCGATTCTTAGAGAAATAG 1038 0.5183 MRLSFSSSYCSRFQSLGLLQSIRPWWSRMESTTRRCRRKDKIIVIMGATGTGKSRLSIDLATRYFPSEIINSDKIQVYRGLDITTNKIPMHERLGVPHHLLGDFDPADGELSPSEFRSHADSTVAAISARRRLPLIVGGSNSFIHALVSGSNSDGLDSVSAELRYDCCFLWVDVSLSILYEYLLRRVDDMFDTGMFQELARFYNPDTDSELAPRVGIRKAIGVPEFNRYFRCFPPRGGGVGDGGGGGGGGSGGGIVMDTHIEGNLARRLLFEEAVEAIKDNTCQLAKRQIGKILRLRSAGWDLRRLNATDAFRAVLASDSGRSSEIWEKEVVEPSVKIVKRFLEK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g01611 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 206 IPR027417 -
Eupl04g01611 345 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 39 343 IPR039657 -
Eupl04g01611 345 Pfam IPP transferase 76 151 - -
Eupl04g01611 345 Pfam IPP transferase 162 290 - -
Eupl04g01611 345 Gene3D - 39 343 IPR027417 -
Eupl04g01611 345 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 176 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g01611 Eupl-Chr4 29107295 29108853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g01611 98 344 C2H2 Transcription Factor Family AT2G27760 26.275 8.04e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g01611 K10760 - nnu:104602941 421.394